Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS08800

Experiment: Carbon source 2-Deoxy-D-Ribose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxy-D-Ribose 5 mM
1,994,615	-				+0.7
1,994,807	-				+0.9
1,994,807	-				+1.1
1,994,813	+				+0.2
1,994,813	-				-0.3
1,994,813	-				+0.0
1,994,861	+				+1.4
1,994,862	-				+2.2
1,994,996	+		HSERO_RS08795	0.17	-1.1
1,995,259	+		HSERO_RS08795	0.68	-2.0
1,995,384	-				-2.1
1,995,419	+				+0.3
1,995,456	-				+2.0
1,995,461	-				-0.9
1,995,463	+				-0.1
1,995,518	+				+0.0
1,995,557	+		HSERO_RS08800	0.10	-0.2
1,995,746	+		HSERO_RS08800	0.29	-0.2
1,995,770	+		HSERO_RS08800	0.32	-0.0
1,995,778	-		HSERO_RS08800	0.33	+0.3
1,995,796	-		HSERO_RS08800	0.34	-0.8
1,995,850	-		HSERO_RS08800	0.40	-0.7
1,995,884	-		HSERO_RS08800	0.43	+1.1
1,996,004	+		HSERO_RS08800	0.56	-0.4
1,996,012	-		HSERO_RS08800	0.57	-0.4
1,996,036	-		HSERO_RS08800	0.59	+0.4
1,996,094	-		HSERO_RS08800	0.65	+0.3
1,996,207	-		HSERO_RS08800	0.76	+0.4
1,996,211	+		HSERO_RS08800	0.77	+0.9
1,996,367	-				-0.1
1,996,430	+				+1.6
1,996,545	+				-0.9