Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS06775

Experiment: Carbon source 2-Deoxy-D-Ribose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxy-D-Ribose 5 mM
1,537,378	+		HSERO_RS06770	0.32	-1.4
1,537,397	-		HSERO_RS06770	0.33	+0.8
1,537,482	+		HSERO_RS06770	0.41	+0.4
1,537,490	-		HSERO_RS06770	0.41	+0.2
1,537,658	-		HSERO_RS06770	0.56	+0.9
1,537,714	+		HSERO_RS06770	0.61	-0.7
1,537,943	-		HSERO_RS06770	0.80	-0.5
1,538,209	-				+0.8
1,538,370	-				-0.2
1,538,389	-				+0.3
1,538,415	-		HSERO_RS06775	0.10	+0.3
1,538,456	+		HSERO_RS06775	0.14	-0.3
1,538,661	-		HSERO_RS06775	0.34	+3.1
1,538,890	+		HSERO_RS06775	0.56	-0.2
1,539,011	+		HSERO_RS06775	0.68	+0.6
1,539,156	+		HSERO_RS06775	0.82	+0.4
1,539,460	+				+0.1
1,539,694	+		HSERO_RS06780	0.20	-0.2
1,539,801	+		HSERO_RS06780	0.26	-0.1
1,539,856	+		HSERO_RS06780	0.29	+0.5
1,540,118	+		HSERO_RS06780	0.43	+0.5
1,540,126	-		HSERO_RS06780	0.44	-0.3
1,540,211	+		HSERO_RS06780	0.48	-0.5
1,540,239	-		HSERO_RS06780	0.50	+2.3
1,540,299	-		HSERO_RS06780	0.53	+0.5
1,540,299	-		HSERO_RS06780	0.53	-0.6