Experiment: copper (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26865 and BWI76_RS26870 overlap by 4 nucleotides BWI76_RS26870 and BWI76_RS26875 are separated by 10 nucleotides BWI76_RS26875 and BWI76_RS26880 are separated by 9 nucleotides
BWI76_RS26865: BWI76_RS26865 - dipeptide ABC transporter ATP-binding protein, at 5,573,511 to 5,574,524
_RS26865
BWI76_RS26870: BWI76_RS26870 - dipeptide ABC transporter ATP-binding protein, at 5,574,521 to 5,575,504
_RS26870
BWI76_RS26875: BWI76_RS26875 - dipeptide ABC transporter permease DppC, at 5,575,515 to 5,576,417
_RS26875
BWI76_RS26880: BWI76_RS26880 - dipeptide ABC transporter permease DppB, at 5,576,427 to 5,577,446
_RS26880
Position (kb)
5575
5576
5577 Strain fitness (log2 ratio)
-1
0
1
2
3 at 5574.579 kb on + strand at 5574.603 kb on - strand at 5574.719 kb on - strand, within BWI76_RS26870 at 5574.920 kb on - strand, within BWI76_RS26870 at 5575.027 kb on + strand, within BWI76_RS26870 at 5575.061 kb on - strand, within BWI76_RS26870 at 5575.193 kb on - strand, within BWI76_RS26870 at 5575.242 kb on + strand, within BWI76_RS26870 at 5575.290 kb on - strand, within BWI76_RS26870 at 5575.411 kb on + strand at 5575.411 kb on + strand at 5575.526 kb on + strand at 5575.550 kb on + strand at 5575.565 kb on + strand at 5575.667 kb on + strand, within BWI76_RS26875 at 5575.766 kb on + strand, within BWI76_RS26875 at 5575.868 kb on + strand, within BWI76_RS26875 at 5576.093 kb on + strand, within BWI76_RS26875 at 5576.093 kb on + strand, within BWI76_RS26875 at 5576.310 kb on - strand at 5576.458 kb on - strand at 5576.469 kb on - strand at 5576.565 kb on - strand, within BWI76_RS26880 at 5576.619 kb on + strand, within BWI76_RS26880 at 5576.622 kb on - strand, within BWI76_RS26880 at 5576.674 kb on - strand, within BWI76_RS26880 at 5576.744 kb on - strand, within BWI76_RS26880 at 5576.744 kb on - strand, within BWI76_RS26880 at 5576.828 kb on + strand, within BWI76_RS26880 at 5576.828 kb on + strand, within BWI76_RS26880 at 5576.891 kb on + strand, within BWI76_RS26880 at 5576.891 kb on + strand, within BWI76_RS26880 at 5576.974 kb on + strand, within BWI76_RS26880 at 5577.151 kb on - strand, within BWI76_RS26880 at 5577.151 kb on - strand, within BWI76_RS26880 at 5577.163 kb on - strand, within BWI76_RS26880 at 5577.210 kb on + strand, within BWI76_RS26880
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2 mM remove 5,574,579 + -0.2 5,574,603 - +0.2 5,574,719 - BWI76_RS26870 0.20 -0.6 5,574,920 - BWI76_RS26870 0.41 -0.2 5,575,027 + BWI76_RS26870 0.51 +1.7 5,575,061 - BWI76_RS26870 0.55 -0.4 5,575,193 - BWI76_RS26870 0.68 +0.2 5,575,242 + BWI76_RS26870 0.73 +0.4 5,575,290 - BWI76_RS26870 0.78 -0.8 5,575,411 + -0.1 5,575,411 + -0.1 5,575,526 + -0.3 5,575,550 + -0.3 5,575,565 + +0.5 5,575,667 + BWI76_RS26875 0.17 +0.8 5,575,766 + BWI76_RS26875 0.28 +3.1 5,575,868 + BWI76_RS26875 0.39 +1.8 5,576,093 + BWI76_RS26875 0.64 +1.1 5,576,093 + BWI76_RS26875 0.64 +0.7 5,576,310 - +3.2 5,576,458 - +0.2 5,576,469 - -0.3 5,576,565 - BWI76_RS26880 0.14 -0.1 5,576,619 + BWI76_RS26880 0.19 +0.5 5,576,622 - BWI76_RS26880 0.19 -1.3 5,576,674 - BWI76_RS26880 0.24 +0.1 5,576,744 - BWI76_RS26880 0.31 +1.8 5,576,744 - BWI76_RS26880 0.31 +0.0 5,576,828 + BWI76_RS26880 0.39 +0.3 5,576,828 + BWI76_RS26880 0.39 +0.1 5,576,891 + BWI76_RS26880 0.45 -0.6 5,576,891 + BWI76_RS26880 0.45 -0.3 5,576,974 + BWI76_RS26880 0.54 +1.2 5,577,151 - BWI76_RS26880 0.71 -1.1 5,577,151 - BWI76_RS26880 0.71 -0.2 5,577,163 - BWI76_RS26880 0.72 -0.0 5,577,210 + BWI76_RS26880 0.77 -0.0
Or see this region's nucleotide sequence