Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS26875

Experiment: copper (II) chloride 2 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS26865 and BWI76_RS26870 overlap by 4 nucleotidesBWI76_RS26870 and BWI76_RS26875 are separated by 10 nucleotidesBWI76_RS26875 and BWI76_RS26880 are separated by 9 nucleotides BWI76_RS26865: BWI76_RS26865 - dipeptide ABC transporter ATP-binding protein, at 5,573,511 to 5,574,524 _RS26865 BWI76_RS26870: BWI76_RS26870 - dipeptide ABC transporter ATP-binding protein, at 5,574,521 to 5,575,504 _RS26870 BWI76_RS26875: BWI76_RS26875 - dipeptide ABC transporter permease DppC, at 5,575,515 to 5,576,417 _RS26875 BWI76_RS26880: BWI76_RS26880 - dipeptide ABC transporter permease DppB, at 5,576,427 to 5,577,446 _RS26880 Position (kb) 5575 5576 5577Strain fitness (log2 ratio) -1 0 1 2 3at 5574.579 kb on + strandat 5574.603 kb on - strandat 5574.719 kb on - strand, within BWI76_RS26870at 5574.920 kb on - strand, within BWI76_RS26870at 5575.027 kb on + strand, within BWI76_RS26870at 5575.061 kb on - strand, within BWI76_RS26870at 5575.193 kb on - strand, within BWI76_RS26870at 5575.242 kb on + strand, within BWI76_RS26870at 5575.290 kb on - strand, within BWI76_RS26870at 5575.411 kb on + strandat 5575.411 kb on + strandat 5575.526 kb on + strandat 5575.550 kb on + strandat 5575.565 kb on + strandat 5575.667 kb on + strand, within BWI76_RS26875at 5575.766 kb on + strand, within BWI76_RS26875at 5575.868 kb on + strand, within BWI76_RS26875at 5576.093 kb on + strand, within BWI76_RS26875at 5576.093 kb on + strand, within BWI76_RS26875at 5576.310 kb on - strandat 5576.458 kb on - strandat 5576.469 kb on - strandat 5576.565 kb on - strand, within BWI76_RS26880at 5576.619 kb on + strand, within BWI76_RS26880at 5576.622 kb on - strand, within BWI76_RS26880at 5576.674 kb on - strand, within BWI76_RS26880at 5576.744 kb on - strand, within BWI76_RS26880at 5576.744 kb on - strand, within BWI76_RS26880at 5576.828 kb on + strand, within BWI76_RS26880at 5576.828 kb on + strand, within BWI76_RS26880at 5576.891 kb on + strand, within BWI76_RS26880at 5576.891 kb on + strand, within BWI76_RS26880at 5576.974 kb on + strand, within BWI76_RS26880at 5577.151 kb on - strand, within BWI76_RS26880at 5577.151 kb on - strand, within BWI76_RS26880at 5577.163 kb on - strand, within BWI76_RS26880at 5577.210 kb on + strand, within BWI76_RS26880

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Per-strain Table

Position Strand Gene LocusTag Fraction copper (II) chloride 2 mM
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5,574,579 + -0.2
5,574,603 - +0.2
5,574,719 - BWI76_RS26870 0.20 -0.6
5,574,920 - BWI76_RS26870 0.41 -0.2
5,575,027 + BWI76_RS26870 0.51 +1.7
5,575,061 - BWI76_RS26870 0.55 -0.4
5,575,193 - BWI76_RS26870 0.68 +0.2
5,575,242 + BWI76_RS26870 0.73 +0.4
5,575,290 - BWI76_RS26870 0.78 -0.8
5,575,411 + -0.1
5,575,411 + -0.1
5,575,526 + -0.3
5,575,550 + -0.3
5,575,565 + +0.5
5,575,667 + BWI76_RS26875 0.17 +0.8
5,575,766 + BWI76_RS26875 0.28 +3.1
5,575,868 + BWI76_RS26875 0.39 +1.8
5,576,093 + BWI76_RS26875 0.64 +1.1
5,576,093 + BWI76_RS26875 0.64 +0.7
5,576,310 - +3.2
5,576,458 - +0.2
5,576,469 - -0.3
5,576,565 - BWI76_RS26880 0.14 -0.1
5,576,619 + BWI76_RS26880 0.19 +0.5
5,576,622 - BWI76_RS26880 0.19 -1.3
5,576,674 - BWI76_RS26880 0.24 +0.1
5,576,744 - BWI76_RS26880 0.31 +1.8
5,576,744 - BWI76_RS26880 0.31 +0.0
5,576,828 + BWI76_RS26880 0.39 +0.3
5,576,828 + BWI76_RS26880 0.39 +0.1
5,576,891 + BWI76_RS26880 0.45 -0.6
5,576,891 + BWI76_RS26880 0.45 -0.3
5,576,974 + BWI76_RS26880 0.54 +1.2
5,577,151 - BWI76_RS26880 0.71 -1.1
5,577,151 - BWI76_RS26880 0.71 -0.2
5,577,163 - BWI76_RS26880 0.72 -0.0
5,577,210 + BWI76_RS26880 0.77 -0.0

Or see this region's nucleotide sequence