Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS22925

Experiment: copper (II) chloride 2 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS22920 and BWI76_RS22925 are separated by 31 nucleotidesBWI76_RS22925 and BWI76_RS22930 are separated by 93 nucleotides BWI76_RS22920: BWI76_RS22920 - MFS transporter, at 4,785,330 to 4,786,640 _RS22920 BWI76_RS22925: BWI76_RS22925 - L-fucose isomerase, at 4,786,672 to 4,788,447 _RS22925 BWI76_RS22930: BWI76_RS22930 - L-fuculokinase (EC 2.7.1.51) (from data), at 4,788,541 to 4,789,959 _RS22930 Position (kb) 4786 4787 4788 4789Strain fitness (log2 ratio) -2 -1 0 1 2at 4785.676 kb on + strand, within BWI76_RS22920at 4785.676 kb on - strand, within BWI76_RS22920at 4785.695 kb on + strand, within BWI76_RS22920at 4785.695 kb on + strand, within BWI76_RS22920at 4785.703 kb on - strand, within BWI76_RS22920at 4785.703 kb on - strand, within BWI76_RS22920at 4785.711 kb on + strand, within BWI76_RS22920at 4785.711 kb on + strand, within BWI76_RS22920at 4785.711 kb on + strand, within BWI76_RS22920at 4785.711 kb on + strand, within BWI76_RS22920at 4785.711 kb on + strand, within BWI76_RS22920at 4785.711 kb on + strand, within BWI76_RS22920at 4785.711 kb on + strand, within BWI76_RS22920at 4785.719 kb on - strand, within BWI76_RS22920at 4785.719 kb on - strand, within BWI76_RS22920at 4785.719 kb on - strand, within BWI76_RS22920at 4785.719 kb on - strand, within BWI76_RS22920at 4785.719 kb on - strand, within BWI76_RS22920at 4785.779 kb on + strand, within BWI76_RS22920at 4785.779 kb on + strand, within BWI76_RS22920at 4785.779 kb on + strand, within BWI76_RS22920at 4785.784 kb on + strand, within BWI76_RS22920at 4785.784 kb on + strand, within BWI76_RS22920at 4785.784 kb on + strand, within BWI76_RS22920at 4785.785 kb on + strand, within BWI76_RS22920at 4785.795 kb on + strand, within BWI76_RS22920at 4785.802 kb on + strand, within BWI76_RS22920at 4785.802 kb on + strand, within BWI76_RS22920at 4785.804 kb on + strand, within BWI76_RS22920at 4785.810 kb on - strand, within BWI76_RS22920at 4785.819 kb on - strand, within BWI76_RS22920at 4785.847 kb on + strand, within BWI76_RS22920at 4785.847 kb on + strand, within BWI76_RS22920at 4785.847 kb on + strand, within BWI76_RS22920at 4785.847 kb on + strand, within BWI76_RS22920at 4785.847 kb on + strand, within BWI76_RS22920at 4785.855 kb on - strand, within BWI76_RS22920at 4785.855 kb on - strand, within BWI76_RS22920at 4785.856 kb on + strand, within BWI76_RS22920at 4785.892 kb on + strand, within BWI76_RS22920at 4785.901 kb on + strand, within BWI76_RS22920at 4785.901 kb on + strand, within BWI76_RS22920at 4785.909 kb on - strand, within BWI76_RS22920at 4785.911 kb on + strand, within BWI76_RS22920at 4785.911 kb on + strand, within BWI76_RS22920at 4785.911 kb on + strand, within BWI76_RS22920at 4785.911 kb on + strand, within BWI76_RS22920at 4785.911 kb on + strand, within BWI76_RS22920at 4785.919 kb on - strand, within BWI76_RS22920at 4785.919 kb on - strand, within BWI76_RS22920at 4785.919 kb on - strand, within BWI76_RS22920at 4785.920 kb on - strand, within BWI76_RS22920at 4785.921 kb on + strand, within BWI76_RS22920at 4785.926 kb on + strand, within BWI76_RS22920at 4785.926 kb on + strand, within BWI76_RS22920at 4785.926 kb on + strand, within BWI76_RS22920at 4785.931 kb on + strand, within BWI76_RS22920at 4785.931 kb on + strand, within BWI76_RS22920at 4785.935 kb on + strand, within BWI76_RS22920at 4785.962 kb on - strand, within BWI76_RS22920at 4785.978 kb on + strand, within BWI76_RS22920at 4786.053 kb on - strand, within BWI76_RS22920at 4786.113 kb on + strand, within BWI76_RS22920at 4786.124 kb on + strand, within BWI76_RS22920at 4786.132 kb on - strand, within BWI76_RS22920at 4786.323 kb on - strand, within BWI76_RS22920at 4786.514 kb on - strandat 4786.524 kb on - strandat 4786.759 kb on + strandat 4786.820 kb on - strandat 4786.948 kb on - strand, within BWI76_RS22925at 4787.415 kb on + strand, within BWI76_RS22925at 4787.423 kb on - strand, within BWI76_RS22925at 4787.439 kb on - strand, within BWI76_RS22925at 4787.633 kb on - strand, within BWI76_RS22925at 4787.699 kb on - strand, within BWI76_RS22925at 4787.737 kb on + strand, within BWI76_RS22925at 4788.026 kb on - strand, within BWI76_RS22925at 4788.179 kb on + strand, within BWI76_RS22925at 4788.284 kb on - strandat 4788.300 kb on + strandat 4788.343 kb on - strandat 4788.570 kb on - strandat 4788.745 kb on + strand, within BWI76_RS22930at 4788.775 kb on + strand, within BWI76_RS22930at 4789.289 kb on - strand, within BWI76_RS22930at 4789.302 kb on + strand, within BWI76_RS22930

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Per-strain Table

Position Strand Gene LocusTag Fraction copper (II) chloride 2 mM
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4,785,676 + BWI76_RS22920 0.26 +0.6
4,785,676 - BWI76_RS22920 0.26 +1.2
4,785,695 + BWI76_RS22920 0.28 +0.1
4,785,695 + BWI76_RS22920 0.28 +2.2
4,785,703 - BWI76_RS22920 0.28 +0.1
4,785,703 - BWI76_RS22920 0.28 -0.8
4,785,711 + BWI76_RS22920 0.29 +0.3
4,785,711 + BWI76_RS22920 0.29 -0.5
4,785,711 + BWI76_RS22920 0.29 -1.2
4,785,711 + BWI76_RS22920 0.29 -1.4
4,785,711 + BWI76_RS22920 0.29 -1.3
4,785,711 + BWI76_RS22920 0.29 -1.8
4,785,711 + BWI76_RS22920 0.29 +0.3
4,785,719 - BWI76_RS22920 0.30 +2.2
4,785,719 - BWI76_RS22920 0.30 -1.8
4,785,719 - BWI76_RS22920 0.30 -1.5
4,785,719 - BWI76_RS22920 0.30 -0.4
4,785,719 - BWI76_RS22920 0.30 -1.8
4,785,779 + BWI76_RS22920 0.34 +0.8
4,785,779 + BWI76_RS22920 0.34 +0.3
4,785,779 + BWI76_RS22920 0.34 -0.9
4,785,784 + BWI76_RS22920 0.35 -0.5
4,785,784 + BWI76_RS22920 0.35 +0.8
4,785,784 + BWI76_RS22920 0.35 -0.7
4,785,785 + BWI76_RS22920 0.35 -0.0
4,785,795 + BWI76_RS22920 0.35 -0.3
4,785,802 + BWI76_RS22920 0.36 -0.4
4,785,802 + BWI76_RS22920 0.36 -0.4
4,785,804 + BWI76_RS22920 0.36 +0.4
4,785,810 - BWI76_RS22920 0.37 +0.6
4,785,819 - BWI76_RS22920 0.37 +0.6
4,785,847 + BWI76_RS22920 0.39 -0.0
4,785,847 + BWI76_RS22920 0.39 -0.4
4,785,847 + BWI76_RS22920 0.39 +0.5
4,785,847 + BWI76_RS22920 0.39 +1.0
4,785,847 + BWI76_RS22920 0.39 -0.6
4,785,855 - BWI76_RS22920 0.40 +1.2
4,785,855 - BWI76_RS22920 0.40 +0.2
4,785,856 + BWI76_RS22920 0.40 -0.3
4,785,892 + BWI76_RS22920 0.43 -0.0
4,785,901 + BWI76_RS22920 0.44 -0.4
4,785,901 + BWI76_RS22920 0.44 -0.8
4,785,909 - BWI76_RS22920 0.44 +0.3
4,785,911 + BWI76_RS22920 0.44 -0.2
4,785,911 + BWI76_RS22920 0.44 -0.1
4,785,911 + BWI76_RS22920 0.44 -0.6
4,785,911 + BWI76_RS22920 0.44 +1.9
4,785,911 + BWI76_RS22920 0.44 -0.2
4,785,919 - BWI76_RS22920 0.45 -0.2
4,785,919 - BWI76_RS22920 0.45 +0.8
4,785,919 - BWI76_RS22920 0.45 -0.3
4,785,920 - BWI76_RS22920 0.45 +0.6
4,785,921 + BWI76_RS22920 0.45 -0.4
4,785,926 + BWI76_RS22920 0.45 -1.5
4,785,926 + BWI76_RS22920 0.45 -0.1
4,785,926 + BWI76_RS22920 0.45 -0.5
4,785,931 + BWI76_RS22920 0.46 +0.5
4,785,931 + BWI76_RS22920 0.46 -1.4
4,785,935 + BWI76_RS22920 0.46 -0.7
4,785,962 - BWI76_RS22920 0.48 -0.3
4,785,978 + BWI76_RS22920 0.49 +1.2
4,786,053 - BWI76_RS22920 0.55 -0.0
4,786,113 + BWI76_RS22920 0.60 -1.4
4,786,124 + BWI76_RS22920 0.61 -0.5
4,786,132 - BWI76_RS22920 0.61 -0.6
4,786,323 - BWI76_RS22920 0.76 +0.3
4,786,514 - +1.6
4,786,524 - -0.6
4,786,759 + +0.9
4,786,820 - -0.6
4,786,948 - BWI76_RS22925 0.16 -0.7
4,787,415 + BWI76_RS22925 0.42 +1.3
4,787,423 - BWI76_RS22925 0.42 +1.0
4,787,439 - BWI76_RS22925 0.43 -0.6
4,787,633 - BWI76_RS22925 0.54 -0.0
4,787,699 - BWI76_RS22925 0.58 -0.2
4,787,737 + BWI76_RS22925 0.60 +0.5
4,788,026 - BWI76_RS22925 0.76 -0.5
4,788,179 + BWI76_RS22925 0.85 -0.3
4,788,284 - +0.1
4,788,300 + -0.6
4,788,343 - -0.7
4,788,570 - +0.7
4,788,745 + BWI76_RS22930 0.14 -0.3
4,788,775 + BWI76_RS22930 0.16 -0.7
4,789,289 - BWI76_RS22930 0.53 -0.1
4,789,302 + BWI76_RS22930 0.54 -0.8

Or see this region's nucleotide sequence