Experiment: copper (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS22725 and BWI76_RS22730 overlap by 19 nucleotides BWI76_RS22730 and BWI76_RS22735 are separated by 9 nucleotides BWI76_RS22735 and BWI76_RS22740 are separated by 14 nucleotides BWI76_RS22740 and BWI76_RS22745 overlap by 4 nucleotides
BWI76_RS22725: BWI76_RS22725 - type I-E CRISPR-associated protein Cas6/Cse3/CasE, at 4,735,717 to 4,736,367
_RS22725
BWI76_RS22730: BWI76_RS22730 - type I-E CRISPR-associated protein Cas5/CasD, at 4,736,349 to 4,737,095
_RS22730
BWI76_RS22735: BWI76_RS22735 - type I-E CRISPR-associated protein Cas7/Cse4/CasC, at 4,737,105 to 4,738,163
_RS22735
BWI76_RS22740: BWI76_RS22740 - type I-E CRISPR-associated protein Cse2/CasB, at 4,738,178 to 4,738,729
_RS22740
BWI76_RS22745: BWI76_RS22745 - type I-E CRISPR-associated protein Cse1/CasA, at 4,738,726 to 4,740,285
_RS22745
Position (kb) 4737
4738
4739 Strain fitness (log2 ratio) -2
-1
0
1 at 4736.183 kb on - strand, within BWI76_RS22725 at 4736.187 kb on + strand, within BWI76_RS22725 at 4736.207 kb on + strand, within BWI76_RS22725 at 4736.329 kb on - strand at 4736.362 kb on + strand at 4736.370 kb on - strand at 4736.462 kb on - strand, within BWI76_RS22730 at 4736.463 kb on - strand, within BWI76_RS22730 at 4736.574 kb on + strand, within BWI76_RS22730 at 4736.680 kb on - strand, within BWI76_RS22730 at 4736.752 kb on + strand, within BWI76_RS22730 at 4736.760 kb on - strand, within BWI76_RS22730 at 4736.784 kb on + strand, within BWI76_RS22730 at 4736.789 kb on + strand, within BWI76_RS22730 at 4736.813 kb on - strand, within BWI76_RS22730 at 4736.885 kb on + strand, within BWI76_RS22730 at 4736.909 kb on - strand, within BWI76_RS22730 at 4736.990 kb on - strand, within BWI76_RS22730 at 4737.010 kb on - strand, within BWI76_RS22730 at 4737.129 kb on + strand at 4737.166 kb on - strand at 4737.215 kb on + strand, within BWI76_RS22735 at 4737.215 kb on + strand, within BWI76_RS22735 at 4737.215 kb on + strand, within BWI76_RS22735 at 4737.478 kb on + strand, within BWI76_RS22735 at 4737.602 kb on + strand, within BWI76_RS22735 at 4737.610 kb on - strand at 4737.806 kb on - strand, within BWI76_RS22735 at 4737.956 kb on + strand, within BWI76_RS22735 at 4738.074 kb on - strand at 4738.243 kb on - strand, within BWI76_RS22740 at 4738.264 kb on + strand, within BWI76_RS22740 at 4738.359 kb on + strand, within BWI76_RS22740 at 4738.359 kb on + strand, within BWI76_RS22740 at 4738.367 kb on - strand, within BWI76_RS22740 at 4738.367 kb on - strand, within BWI76_RS22740 at 4738.431 kb on - strand, within BWI76_RS22740 at 4738.494 kb on + strand, within BWI76_RS22740 at 4738.549 kb on + strand, within BWI76_RS22740 at 4738.701 kb on + strand at 4738.704 kb on - strand at 4738.846 kb on - strand at 4738.853 kb on + strand at 4739.070 kb on + strand, within BWI76_RS22745 at 4739.070 kb on + strand, within BWI76_RS22745 at 4739.070 kb on + strand, within BWI76_RS22745 at 4739.070 kb on + strand at 4739.070 kb on + strand, within BWI76_RS22745 at 4739.070 kb on + strand, within BWI76_RS22745 at 4739.070 kb on + strand, within BWI76_RS22745 at 4739.078 kb on - strand, within BWI76_RS22745 at 4739.078 kb on - strand, within BWI76_RS22745 at 4739.078 kb on - strand at 4739.078 kb on - strand, within BWI76_RS22745 at 4739.078 kb on - strand, within BWI76_RS22745 at 4739.159 kb on - strand, within BWI76_RS22745
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2 mM remove 4,736,183 - BWI76_RS22725 0.72 -0.0 4,736,187 + BWI76_RS22725 0.72 -0.1 4,736,207 + BWI76_RS22725 0.75 -0.0 4,736,329 - -0.1 4,736,362 + -1.9 4,736,370 - +0.4 4,736,462 - BWI76_RS22730 0.15 +0.8 4,736,463 - BWI76_RS22730 0.15 +0.1 4,736,574 + BWI76_RS22730 0.30 +0.0 4,736,680 - BWI76_RS22730 0.44 +0.0 4,736,752 + BWI76_RS22730 0.54 +0.2 4,736,760 - BWI76_RS22730 0.55 -1.3 4,736,784 + BWI76_RS22730 0.58 -0.7 4,736,789 + BWI76_RS22730 0.59 +0.2 4,736,813 - BWI76_RS22730 0.62 -0.1 4,736,885 + BWI76_RS22730 0.72 -0.3 4,736,909 - BWI76_RS22730 0.75 -0.1 4,736,990 - BWI76_RS22730 0.86 +0.1 4,737,010 - BWI76_RS22730 0.88 -0.3 4,737,129 + -0.5 4,737,166 - -1.0 4,737,215 + BWI76_RS22735 0.10 -0.6 4,737,215 + BWI76_RS22735 0.10 -0.7 4,737,215 + BWI76_RS22735 0.10 -0.8 4,737,478 + BWI76_RS22735 0.35 -0.5 4,737,602 + BWI76_RS22735 0.47 -0.8 4,737,610 - +0.8 4,737,806 - BWI76_RS22735 0.66 -0.3 4,737,956 + BWI76_RS22735 0.80 -0.7 4,738,074 - -0.3 4,738,243 - BWI76_RS22740 0.12 +0.3 4,738,264 + BWI76_RS22740 0.16 +0.2 4,738,359 + BWI76_RS22740 0.33 -0.4 4,738,359 + BWI76_RS22740 0.33 -0.2 4,738,367 - BWI76_RS22740 0.34 +0.3 4,738,367 - BWI76_RS22740 0.34 +0.5 4,738,431 - BWI76_RS22740 0.46 +0.3 4,738,494 + BWI76_RS22740 0.57 -0.0 4,738,549 + BWI76_RS22740 0.67 +0.5 4,738,701 + -0.2 4,738,704 - +0.9 4,738,846 - +0.4 4,738,853 + -0.7 4,739,070 + BWI76_RS22745 0.22 +0.7 4,739,070 + BWI76_RS22745 0.22 -0.4 4,739,070 + BWI76_RS22745 0.22 +0.1 4,739,070 + +1.1 4,739,070 + BWI76_RS22745 0.22 +0.7 4,739,070 + BWI76_RS22745 0.22 +0.3 4,739,070 + BWI76_RS22745 0.22 +0.5 4,739,078 - BWI76_RS22745 0.23 +0.3 4,739,078 - BWI76_RS22745 0.23 +0.0 4,739,078 - +0.4 4,739,078 - BWI76_RS22745 0.23 +1.2 4,739,078 - BWI76_RS22745 0.23 -0.2 4,739,159 - BWI76_RS22745 0.28 -0.1
Or see this region's nucleotide sequence