Experiment: copper (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS20445 and BWI76_RS20450 are separated by 20 nucleotides BWI76_RS20450 and BWI76_RS20455 are separated by 209 nucleotides BWI76_RS20455 and BWI76_RS20460 overlap by 1 nucleotides
BWI76_RS20445: BWI76_RS20445 - endonuclease SmrB, at 4,279,549 to 4,280,100
_RS20445
BWI76_RS20450: BWI76_RS20450 - phosphohistidine phosphatase, at 4,280,121 to 4,280,606
_RS20450
BWI76_RS20455: BWI76_RS20455 - multifunctional fatty acid oxidation complex subunit alpha, at 4,280,816 to 4,282,960
_RS20455
BWI76_RS20460: BWI76_RS20460 - acetyl-CoA C-acyltransferase FadI, at 4,282,960 to 4,284,270
_RS20460
Position (kb)
4280
4281
4282
4283 Strain fitness (log2 ratio)
-1
0
1
2
3 at 4280.944 kb on - strand at 4280.947 kb on + strand at 4281.002 kb on + strand at 4281.347 kb on - strand, within BWI76_RS20455 at 4281.620 kb on + strand, within BWI76_RS20455 at 4281.648 kb on - strand, within BWI76_RS20455 at 4281.656 kb on - strand, within BWI76_RS20455 at 4281.714 kb on + strand, within BWI76_RS20455 at 4281.906 kb on - strand, within BWI76_RS20455 at 4281.906 kb on - strand, within BWI76_RS20455 at 4282.004 kb on + strand, within BWI76_RS20455 at 4282.380 kb on + strand, within BWI76_RS20455 at 4282.432 kb on - strand, within BWI76_RS20455 at 4282.593 kb on - strand, within BWI76_RS20455 at 4282.606 kb on + strand, within BWI76_RS20455 at 4282.619 kb on + strand, within BWI76_RS20455 at 4282.815 kb on - strand at 4282.911 kb on + strand at 4282.977 kb on - strand at 4282.998 kb on - strand at 4283.206 kb on + strand, within BWI76_RS20460 at 4283.214 kb on - strand, within BWI76_RS20460 at 4283.625 kb on - strand, within BWI76_RS20460 at 4283.648 kb on - strand at 4283.796 kb on + strand, within BWI76_RS20460 at 4283.897 kb on - strand, within BWI76_RS20460
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2 mM remove 4,280,944 - +0.2 4,280,947 + +0.5 4,281,002 + +0.7 4,281,347 - BWI76_RS20455 0.25 -0.1 4,281,620 + BWI76_RS20455 0.37 +0.3 4,281,648 - BWI76_RS20455 0.39 +3.0 4,281,656 - BWI76_RS20455 0.39 +0.5 4,281,714 + BWI76_RS20455 0.42 -0.3 4,281,906 - BWI76_RS20455 0.51 +0.1 4,281,906 - BWI76_RS20455 0.51 +0.6 4,282,004 + BWI76_RS20455 0.55 -0.3 4,282,380 + BWI76_RS20455 0.73 +0.7 4,282,432 - BWI76_RS20455 0.75 +0.1 4,282,593 - BWI76_RS20455 0.83 +0.6 4,282,606 + BWI76_RS20455 0.83 +1.2 4,282,619 + BWI76_RS20455 0.84 +0.4 4,282,815 - +0.7 4,282,911 + +1.2 4,282,977 - +1.0 4,282,998 - -0.6 4,283,206 + BWI76_RS20460 0.19 -0.9 4,283,214 - BWI76_RS20460 0.19 +0.2 4,283,625 - BWI76_RS20460 0.51 +3.3 4,283,648 - +2.3 4,283,796 + BWI76_RS20460 0.64 +1.0 4,283,897 - BWI76_RS20460 0.71 -0.5
Or see this region's nucleotide sequence