Experiment: copper (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19790 and BWI76_RS19795 are separated by 1 nucleotides BWI76_RS19795 and BWI76_RS19800 are separated by 3 nucleotides BWI76_RS19800 and BWI76_RS19805 are separated by 330 nucleotides
BWI76_RS19790: BWI76_RS19790 - putative binding-protein-dependent transporter, at 4,138,597 to 4,139,622
_RS19790
BWI76_RS19795: BWI76_RS19795 - microcin C ABC transporter ATP-binding protein YejF, at 4,139,624 to 4,141,213
_RS19795
BWI76_RS19800: BWI76_RS19800 - hypothetical protein, at 4,141,217 to 4,141,561
_RS19800
BWI76_RS19805: BWI76_RS19805 - Bcr/CflA family multidrug efflux MFS transporter, at 4,141,892 to 4,143,088
_RS19805
Position (kb)
4139
4140
4141
4142 Strain fitness (log2 ratio)
-1
0
1
2
3 at 4138.837 kb on - strand, within BWI76_RS19790 at 4138.964 kb on - strand, within BWI76_RS19790 at 4139.086 kb on + strand, within BWI76_RS19790 at 4139.115 kb on + strand, within BWI76_RS19790 at 4139.181 kb on + strand, within BWI76_RS19790 at 4139.189 kb on - strand, within BWI76_RS19790 at 4139.393 kb on + strand, within BWI76_RS19790 at 4140.272 kb on - strand, within BWI76_RS19795 at 4140.272 kb on - strand, within BWI76_RS19795 at 4140.381 kb on - strand, within BWI76_RS19795 at 4140.381 kb on - strand, within BWI76_RS19795 at 4140.409 kb on + strand, within BWI76_RS19795 at 4140.577 kb on - strand, within BWI76_RS19795 at 4140.926 kb on + strand, within BWI76_RS19795 at 4141.032 kb on - strand, within BWI76_RS19795 at 4141.052 kb on - strand, within BWI76_RS19795 at 4141.109 kb on - strand at 4141.152 kb on - strand at 4141.532 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2 mM remove 4,138,837 - BWI76_RS19790 0.23 -0.1 4,138,964 - BWI76_RS19790 0.36 -0.9 4,139,086 + BWI76_RS19790 0.48 -0.7 4,139,115 + BWI76_RS19790 0.50 +0.3 4,139,181 + BWI76_RS19790 0.57 +1.2 4,139,189 - BWI76_RS19790 0.58 +0.2 4,139,393 + BWI76_RS19790 0.78 +2.2 4,140,272 - BWI76_RS19795 0.41 -0.3 4,140,272 - BWI76_RS19795 0.41 +0.3 4,140,381 - BWI76_RS19795 0.48 +0.4 4,140,381 - BWI76_RS19795 0.48 +0.1 4,140,409 + BWI76_RS19795 0.49 +1.7 4,140,577 - BWI76_RS19795 0.60 -0.0 4,140,926 + BWI76_RS19795 0.82 +0.8 4,141,032 - BWI76_RS19795 0.89 +2.9 4,141,052 - BWI76_RS19795 0.90 -0.1 4,141,109 - +1.4 4,141,152 - -0.7 4,141,532 + +0.3
Or see this region's nucleotide sequence