Experiment: copper (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS13395 and BWI76_RS13400 are separated by 326 nucleotides BWI76_RS13400 and BWI76_RS13405 are separated by 365 nucleotides
BWI76_RS13395: BWI76_RS13395 - cytochrome D ubiquinol oxidase subunit I, at 2,792,601 to 2,793,998
_RS13395
BWI76_RS13400: BWI76_RS13400 - GntR family transcriptional regulator, at 2,794,325 to 2,795,737
_RS13400
BWI76_RS13405: BWI76_RS13405 - spermidine/putrescine ABC transporter substrate-binding protein, at 2,796,103 to 2,797,248
_RS13405
Position (kb)
2794
2795
2796 Strain fitness (log2 ratio)
-1
0
1
2 at 2793.425 kb on - strand, within BWI76_RS13395 at 2793.509 kb on - strand, within BWI76_RS13395 at 2793.623 kb on - strand, within BWI76_RS13395 at 2793.650 kb on + strand, within BWI76_RS13395 at 2794.031 kb on + strand at 2794.147 kb on - strand at 2794.252 kb on - strand at 2794.381 kb on + strand at 2794.722 kb on - strand, within BWI76_RS13400 at 2795.088 kb on + strand, within BWI76_RS13400 at 2795.096 kb on - strand, within BWI76_RS13400 at 2795.389 kb on + strand, within BWI76_RS13400 at 2795.401 kb on + strand, within BWI76_RS13400 at 2795.601 kb on - strand at 2795.663 kb on + strand at 2795.736 kb on + strand at 2795.751 kb on + strand at 2795.756 kb on + strand at 2795.772 kb on + strand at 2795.783 kb on + strand at 2796.023 kb on - strand at 2796.092 kb on + strand at 2796.141 kb on + strand at 2796.362 kb on + strand, within BWI76_RS13405 at 2796.370 kb on - strand, within BWI76_RS13405 at 2796.510 kb on + strand, within BWI76_RS13405
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2 mM remove 2,793,425 - BWI76_RS13395 0.59 +0.3 2,793,509 - BWI76_RS13395 0.65 -0.1 2,793,623 - BWI76_RS13395 0.73 -0.2 2,793,650 + BWI76_RS13395 0.75 -0.3 2,794,031 + -1.1 2,794,147 - -0.9 2,794,252 - -0.4 2,794,381 + +0.8 2,794,722 - BWI76_RS13400 0.28 +0.1 2,795,088 + BWI76_RS13400 0.54 +0.8 2,795,096 - BWI76_RS13400 0.55 +0.7 2,795,389 + BWI76_RS13400 0.75 -0.4 2,795,401 + BWI76_RS13400 0.76 +2.4 2,795,601 - -0.2 2,795,663 + -0.2 2,795,736 + -1.0 2,795,751 + +0.7 2,795,756 + -0.2 2,795,772 + +0.1 2,795,783 + +0.4 2,796,023 - -0.3 2,796,092 + -0.8 2,796,141 + -0.1 2,796,362 + BWI76_RS13405 0.23 -0.3 2,796,370 - BWI76_RS13405 0.23 -0.7 2,796,510 + BWI76_RS13405 0.36 -0.3
Or see this region's nucleotide sequence