Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS13400
Experiment: copper (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | copper (II) chloride 2 mM |
---|---|---|---|---|---|
remove | |||||
2,793,425 | - | BWI76_RS13395 | 0.59 | +0.3 | |
2,793,509 | - | BWI76_RS13395 | 0.65 | -0.1 | |
2,793,623 | - | BWI76_RS13395 | 0.73 | -0.2 | |
2,793,650 | + | BWI76_RS13395 | 0.75 | -0.3 | |
2,794,031 | + | -1.1 | |||
2,794,147 | - | -0.9 | |||
2,794,252 | - | -0.4 | |||
2,794,381 | + | +0.8 | |||
2,794,722 | - | BWI76_RS13400 | 0.28 | +0.1 | |
2,795,088 | + | BWI76_RS13400 | 0.54 | +0.8 | |
2,795,096 | - | BWI76_RS13400 | 0.55 | +0.7 | |
2,795,389 | + | BWI76_RS13400 | 0.75 | -0.4 | |
2,795,401 | + | BWI76_RS13400 | 0.76 | +2.4 | |
2,795,601 | - | -0.2 | |||
2,795,663 | + | -0.2 | |||
2,795,736 | + | -1.0 | |||
2,795,751 | + | +0.7 | |||
2,795,756 | + | -0.2 | |||
2,795,772 | + | +0.1 | |||
2,795,783 | + | +0.4 | |||
2,796,023 | - | -0.3 | |||
2,796,092 | + | -0.8 | |||
2,796,141 | + | -0.1 | |||
2,796,362 | + | BWI76_RS13405 | 0.23 | -0.3 | |
2,796,370 | - | BWI76_RS13405 | 0.23 | -0.7 | |
2,796,510 | + | BWI76_RS13405 | 0.36 | -0.3 |
Or see this region's nucleotide sequence