Experiment: copper (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS12435 and BWI76_RS12440 are separated by 25 nucleotides BWI76_RS12440 and BWI76_RS12445 overlap by 10 nucleotides
BWI76_RS12435: BWI76_RS12435 - putative amino acid amidohydrolase, at 2,598,942 to 2,600,111
_RS12435
BWI76_RS12440: BWI76_RS12440 - MFS transporter, at 2,600,137 to 2,601,528
_RS12440
BWI76_RS12445: BWI76_RS12445 - phage shock protein operon transcriptional activator, at 2,601,519 to 2,602,493
_RS12445
Position (kb)
2600
2601
2602 Strain fitness (log2 ratio)
-1
0
1 at 2599.137 kb on - strand, within BWI76_RS12435 at 2599.211 kb on + strand, within BWI76_RS12435 at 2599.219 kb on - strand, within BWI76_RS12435 at 2599.285 kb on - strand, within BWI76_RS12435 at 2599.366 kb on - strand, within BWI76_RS12435 at 2599.366 kb on - strand, within BWI76_RS12435 at 2599.366 kb on - strand, within BWI76_RS12435 at 2599.381 kb on - strand, within BWI76_RS12435 at 2599.657 kb on + strand, within BWI76_RS12435 at 2599.664 kb on + strand, within BWI76_RS12435 at 2599.809 kb on + strand, within BWI76_RS12435 at 2599.809 kb on + strand, within BWI76_RS12435 at 2599.817 kb on - strand, within BWI76_RS12435 at 2599.897 kb on + strand, within BWI76_RS12435 at 2600.149 kb on - strand at 2600.452 kb on - strand, within BWI76_RS12440 at 2600.454 kb on + strand, within BWI76_RS12440 at 2600.462 kb on - strand, within BWI76_RS12440 at 2600.564 kb on + strand, within BWI76_RS12440 at 2600.739 kb on - strand, within BWI76_RS12440 at 2600.821 kb on + strand, within BWI76_RS12440 at 2600.980 kb on - strand, within BWI76_RS12440 at 2601.066 kb on - strand, within BWI76_RS12440 at 2601.192 kb on + strand, within BWI76_RS12440 at 2601.304 kb on - strand, within BWI76_RS12440 at 2601.352 kb on - strand, within BWI76_RS12440 at 2601.411 kb on + strand at 2601.442 kb on - strand at 2601.473 kb on + strand at 2601.655 kb on - strand, within BWI76_RS12445 at 2601.837 kb on + strand, within BWI76_RS12445 at 2601.993 kb on + strand, within BWI76_RS12445 at 2602.265 kb on + strand, within BWI76_RS12445 at 2602.423 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2 mM remove 2,599,137 - BWI76_RS12435 0.17 -0.2 2,599,211 + BWI76_RS12435 0.23 -0.7 2,599,219 - BWI76_RS12435 0.24 -1.5 2,599,285 - BWI76_RS12435 0.29 +0.1 2,599,366 - BWI76_RS12435 0.36 -0.3 2,599,366 - BWI76_RS12435 0.36 +0.3 2,599,366 - BWI76_RS12435 0.36 -0.2 2,599,381 - BWI76_RS12435 0.38 +0.0 2,599,657 + BWI76_RS12435 0.61 -0.1 2,599,664 + BWI76_RS12435 0.62 +0.0 2,599,809 + BWI76_RS12435 0.74 +1.5 2,599,809 + BWI76_RS12435 0.74 -0.1 2,599,817 - BWI76_RS12435 0.75 -0.2 2,599,897 + BWI76_RS12435 0.82 -0.1 2,600,149 - -0.4 2,600,452 - BWI76_RS12440 0.23 +0.2 2,600,454 + BWI76_RS12440 0.23 +0.6 2,600,462 - BWI76_RS12440 0.23 +0.6 2,600,564 + BWI76_RS12440 0.31 +0.7 2,600,739 - BWI76_RS12440 0.43 +1.3 2,600,821 + BWI76_RS12440 0.49 +1.6 2,600,980 - BWI76_RS12440 0.61 +0.1 2,601,066 - BWI76_RS12440 0.67 +0.6 2,601,192 + BWI76_RS12440 0.76 -0.2 2,601,304 - BWI76_RS12440 0.84 +0.1 2,601,352 - BWI76_RS12440 0.87 +0.3 2,601,411 + -0.5 2,601,442 - +0.2 2,601,473 + +0.2 2,601,655 - BWI76_RS12445 0.14 -0.8 2,601,837 + BWI76_RS12445 0.33 -0.3 2,601,993 + BWI76_RS12445 0.49 -0.0 2,602,265 + BWI76_RS12445 0.77 -0.5 2,602,423 + -0.2
Or see this region's nucleotide sequence