Experiment: copper (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11570 and BWI76_RS11575 are separated by 130 nucleotides BWI76_RS11575 and BWI76_RS11580 are separated by 10 nucleotides BWI76_RS11580 and BWI76_RS11585 are separated by 94 nucleotides
BWI76_RS11570: BWI76_RS11570 - MFS transporter, at 2,434,019 to 2,435,374
_RS11570
BWI76_RS11575: BWI76_RS11575 - nicotinamidase/pyrazinamidase, at 2,435,505 to 2,436,146
_RS11575
BWI76_RS11580: BWI76_RS11580 - L-asparaginase 1, at 2,436,157 to 2,437,173
_RS11580
BWI76_RS11585: BWI76_RS11585 - signal peptide peptidase A, at 2,437,268 to 2,439,121
_RS11585
Position (kb)
2436
2437
2438 Strain fitness (log2 ratio)
-1
0
1 at 2435.714 kb on + strand, within BWI76_RS11575 at 2435.877 kb on + strand, within BWI76_RS11575 at 2435.917 kb on - strand at 2435.947 kb on + strand, within BWI76_RS11575 at 2435.955 kb on - strand, within BWI76_RS11575 at 2436.064 kb on + strand, within BWI76_RS11575 at 2436.071 kb on - strand, within BWI76_RS11575 at 2436.375 kb on + strand, within BWI76_RS11580 at 2436.931 kb on - strand, within BWI76_RS11580 at 2437.185 kb on + strand at 2437.206 kb on + strand at 2437.206 kb on + strand at 2437.206 kb on + strand at 2437.209 kb on - strand at 2437.214 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2 mM remove 2,435,714 + BWI76_RS11575 0.33 +0.2 2,435,877 + BWI76_RS11575 0.58 +0.3 2,435,917 - +1.3 2,435,947 + BWI76_RS11575 0.69 +0.1 2,435,955 - BWI76_RS11575 0.70 +0.7 2,436,064 + BWI76_RS11575 0.87 +1.1 2,436,071 - BWI76_RS11575 0.88 +0.4 2,436,375 + BWI76_RS11580 0.21 -1.0 2,436,931 - BWI76_RS11580 0.76 -0.7 2,437,185 + -0.2 2,437,206 + +0.9 2,437,206 + +0.3 2,437,206 + -0.2 2,437,209 - -0.2 2,437,214 - +0.3
Or see this region's nucleotide sequence