Experiment: copper (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS10630 and BWI76_RS10635 are separated by 415 nucleotides BWI76_RS10635 and BWI76_RS10640 are separated by 1 nucleotides
BWI76_RS10630: BWI76_RS10630 - LuxR family transcriptional regulator, at 2,244,494 to 2,245,567
_RS10630
BWI76_RS10635: BWI76_RS10635 - GGDEF domain-containing protein, at 2,245,983 to 2,246,885
_RS10635
BWI76_RS10640: BWI76_RS10640 - AraC family transcriptional regulator, at 2,246,887 to 2,247,720
_RS10640
Position (kb)
2245
2246
2247 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2245.002 kb on - strand, within BWI76_RS10630 at 2245.002 kb on - strand, within BWI76_RS10630 at 2245.045 kb on + strand, within BWI76_RS10630 at 2245.045 kb on + strand, within BWI76_RS10630 at 2245.046 kb on - strand, within BWI76_RS10630 at 2245.056 kb on - strand, within BWI76_RS10630 at 2245.056 kb on - strand, within BWI76_RS10630 at 2245.123 kb on + strand, within BWI76_RS10630 at 2245.123 kb on + strand, within BWI76_RS10630 at 2245.131 kb on - strand, within BWI76_RS10630 at 2245.131 kb on - strand, within BWI76_RS10630 at 2245.176 kb on + strand, within BWI76_RS10630 at 2245.192 kb on + strand, within BWI76_RS10630 at 2245.200 kb on - strand, within BWI76_RS10630 at 2245.295 kb on - strand, within BWI76_RS10630 at 2245.298 kb on - strand, within BWI76_RS10630 at 2245.298 kb on - strand, within BWI76_RS10630 at 2245.298 kb on - strand, within BWI76_RS10630 at 2245.298 kb on - strand at 2245.298 kb on - strand, within BWI76_RS10630 at 2245.298 kb on - strand, within BWI76_RS10630 at 2245.298 kb on - strand, within BWI76_RS10630 at 2245.298 kb on - strand, within BWI76_RS10630 at 2245.298 kb on - strand, within BWI76_RS10630 at 2245.298 kb on - strand, within BWI76_RS10630 at 2245.298 kb on - strand, within BWI76_RS10630 at 2245.298 kb on - strand, within BWI76_RS10630 at 2245.300 kb on - strand, within BWI76_RS10630 at 2245.398 kb on - strand, within BWI76_RS10630 at 2245.400 kb on + strand, within BWI76_RS10630 at 2245.441 kb on - strand, within BWI76_RS10630 at 2245.441 kb on - strand, within BWI76_RS10630 at 2245.448 kb on + strand, within BWI76_RS10630 at 2245.456 kb on - strand, within BWI76_RS10630 at 2245.456 kb on - strand, within BWI76_RS10630 at 2245.522 kb on - strand at 2245.522 kb on - strand at 2245.600 kb on + strand at 2245.600 kb on + strand at 2245.601 kb on - strand at 2245.608 kb on - strand at 2245.608 kb on - strand at 2245.608 kb on - strand at 2245.608 kb on - strand at 2245.608 kb on - strand at 2245.608 kb on - strand at 2245.608 kb on - strand at 2245.613 kb on - strand at 2245.613 kb on - strand at 2245.613 kb on - strand at 2245.613 kb on - strand at 2245.613 kb on - strand at 2245.615 kb on + strand at 2245.615 kb on + strand at 2245.615 kb on + strand at 2245.615 kb on + strand at 2245.615 kb on + strand at 2245.618 kb on - strand at 2245.623 kb on - strand at 2245.623 kb on - strand at 2245.623 kb on - strand at 2245.623 kb on - strand at 2245.623 kb on - strand at 2245.623 kb on - strand at 2245.623 kb on - strand at 2245.623 kb on - strand at 2245.629 kb on + strand at 2245.629 kb on + strand at 2245.637 kb on - strand at 2245.637 kb on - strand at 2245.637 kb on - strand at 2245.637 kb on - strand at 2245.637 kb on - strand at 2245.637 kb on - strand at 2245.637 kb on - strand at 2245.670 kb on - strand at 2245.808 kb on - strand at 2245.814 kb on - strand at 2245.838 kb on - strand at 2245.883 kb on - strand at 2245.893 kb on - strand at 2245.908 kb on + strand at 2245.908 kb on + strand at 2245.914 kb on - strand at 2245.916 kb on - strand at 2245.916 kb on - strand at 2245.916 kb on - strand at 2245.916 kb on - strand at 2245.916 kb on - strand at 2245.916 kb on - strand at 2245.916 kb on - strand at 2245.916 kb on - strand at 2245.916 kb on - strand at 2245.965 kb on + strand at 2245.974 kb on + strand at 2245.977 kb on - strand at 2245.982 kb on - strand at 2246.074 kb on + strand, within BWI76_RS10635 at 2246.593 kb on + strand, within BWI76_RS10635 at 2246.699 kb on - strand, within BWI76_RS10635 at 2246.736 kb on - strand, within BWI76_RS10635 at 2246.870 kb on + strand at 2246.992 kb on + strand, within BWI76_RS10640 at 2247.121 kb on + strand, within BWI76_RS10640 at 2247.148 kb on - strand, within BWI76_RS10640 at 2247.575 kb on - strand, within BWI76_RS10640 at 2247.644 kb on + strand at 2247.729 kb on + strand at 2247.737 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2 mM remove 2,245,002 - BWI76_RS10630 0.47 -1.0 2,245,002 - BWI76_RS10630 0.47 -0.3 2,245,045 + BWI76_RS10630 0.51 +0.1 2,245,045 + BWI76_RS10630 0.51 -0.4 2,245,046 - BWI76_RS10630 0.51 +0.7 2,245,056 - BWI76_RS10630 0.52 +0.9 2,245,056 - BWI76_RS10630 0.52 -0.5 2,245,123 + BWI76_RS10630 0.59 -1.4 2,245,123 + BWI76_RS10630 0.59 +1.1 2,245,131 - BWI76_RS10630 0.59 -1.4 2,245,131 - BWI76_RS10630 0.59 +0.1 2,245,176 + BWI76_RS10630 0.64 -0.3 2,245,192 + BWI76_RS10630 0.65 -0.6 2,245,200 - BWI76_RS10630 0.66 -0.4 2,245,295 - BWI76_RS10630 0.75 -1.1 2,245,298 - BWI76_RS10630 0.75 +0.8 2,245,298 - BWI76_RS10630 0.75 +0.0 2,245,298 - BWI76_RS10630 0.75 +0.5 2,245,298 - +0.9 2,245,298 - BWI76_RS10630 0.75 +0.6 2,245,298 - BWI76_RS10630 0.75 +0.1 2,245,298 - BWI76_RS10630 0.75 -0.3 2,245,298 - BWI76_RS10630 0.75 +1.2 2,245,298 - BWI76_RS10630 0.75 -1.9 2,245,298 - BWI76_RS10630 0.75 +0.2 2,245,298 - BWI76_RS10630 0.75 +0.3 2,245,298 - BWI76_RS10630 0.75 +0.1 2,245,300 - BWI76_RS10630 0.75 -1.7 2,245,398 - BWI76_RS10630 0.84 +0.2 2,245,400 + BWI76_RS10630 0.84 -1.3 2,245,441 - BWI76_RS10630 0.88 -0.0 2,245,441 - BWI76_RS10630 0.88 -1.4 2,245,448 + BWI76_RS10630 0.89 -0.3 2,245,456 - BWI76_RS10630 0.90 -1.4 2,245,456 - BWI76_RS10630 0.90 +0.3 2,245,522 - -0.4 2,245,522 - +1.2 2,245,600 + +1.9 2,245,600 + +0.5 2,245,601 - -0.1 2,245,608 - -0.5 2,245,608 - -0.3 2,245,608 - +0.6 2,245,608 - -0.0 2,245,608 - -0.1 2,245,608 - +0.0 2,245,608 - +0.5 2,245,613 - -0.3 2,245,613 - +1.1 2,245,613 - -0.2 2,245,613 - -1.1 2,245,613 - +0.0 2,245,615 + +0.9 2,245,615 + +0.9 2,245,615 + -0.6 2,245,615 + -0.4 2,245,615 + +1.5 2,245,618 - +0.0 2,245,623 - -1.7 2,245,623 - -0.3 2,245,623 - -0.1 2,245,623 - +0.1 2,245,623 - -0.5 2,245,623 - +0.2 2,245,623 - +0.3 2,245,623 - -1.4 2,245,629 + -1.4 2,245,629 + -2.4 2,245,637 - +0.0 2,245,637 - -1.2 2,245,637 - -0.6 2,245,637 - -1.5 2,245,637 - +0.4 2,245,637 - +0.1 2,245,637 - -1.3 2,245,670 - +0.3 2,245,808 - -0.5 2,245,814 - +0.3 2,245,838 - -1.2 2,245,883 - +1.5 2,245,893 - +0.4 2,245,908 + -1.2 2,245,908 + -0.5 2,245,914 - -1.3 2,245,916 - -0.7 2,245,916 - -0.6 2,245,916 - +0.5 2,245,916 - -0.2 2,245,916 - -0.2 2,245,916 - +0.0 2,245,916 - +0.5 2,245,916 - +0.2 2,245,916 - -0.0 2,245,965 + -0.8 2,245,974 + +1.4 2,245,977 - -0.5 2,245,982 - +1.2 2,246,074 + BWI76_RS10635 0.10 +1.9 2,246,593 + BWI76_RS10635 0.68 +0.2 2,246,699 - BWI76_RS10635 0.79 -0.4 2,246,736 - BWI76_RS10635 0.83 +0.7 2,246,870 + +0.1 2,246,992 + BWI76_RS10640 0.13 -1.9 2,247,121 + BWI76_RS10640 0.28 -0.8 2,247,148 - BWI76_RS10640 0.31 +0.7 2,247,575 - BWI76_RS10640 0.82 -0.1 2,247,644 + -1.3 2,247,729 + +2.7 2,247,737 - -0.2
Or see this region's nucleotide sequence