Experiment: copper (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS10480 and BWI76_RS10485 are separated by 10 nucleotides BWI76_RS10485 and BWI76_RS10490 are separated by 13 nucleotides
BWI76_RS10480: BWI76_RS10480 - amino acid ABC transporter substrate-binding protein, at 2,214,370 to 2,215,398
_RS10480
BWI76_RS10485: BWI76_RS10485 - (hypo)xanthine hydroxylase reductase, at 2,215,409 to 2,216,377
_RS10485
BWI76_RS10490: BWI76_RS10490 - vanillate O-demethylase oxygenase subunit, at 2,216,391 to 2,217,428
_RS10490
Position (kb)
2215
2216
2217 Strain fitness (log2 ratio)
-1
0
1
2 at 2214.616 kb on + strand, within BWI76_RS10480 at 2214.725 kb on + strand, within BWI76_RS10480 at 2214.753 kb on + strand, within BWI76_RS10480 at 2214.787 kb on - strand, within BWI76_RS10480 at 2214.854 kb on - strand, within BWI76_RS10480 at 2214.915 kb on + strand, within BWI76_RS10480 at 2214.923 kb on - strand, within BWI76_RS10480 at 2214.941 kb on + strand, within BWI76_RS10480 at 2214.978 kb on + strand, within BWI76_RS10480 at 2215.011 kb on + strand, within BWI76_RS10480 at 2215.029 kb on + strand, within BWI76_RS10480 at 2215.037 kb on - strand, within BWI76_RS10480 at 2215.037 kb on - strand at 2215.197 kb on + strand, within BWI76_RS10480 at 2215.358 kb on + strand at 2215.464 kb on - strand at 2215.566 kb on + strand, within BWI76_RS10485 at 2215.611 kb on - strand, within BWI76_RS10485 at 2216.066 kb on + strand, within BWI76_RS10485 at 2216.201 kb on + strand, within BWI76_RS10485 at 2216.552 kb on + strand, within BWI76_RS10490 at 2216.552 kb on + strand, within BWI76_RS10490 at 2216.560 kb on - strand, within BWI76_RS10490 at 2216.841 kb on - strand, within BWI76_RS10490 at 2216.881 kb on + strand, within BWI76_RS10490 at 2217.254 kb on + strand, within BWI76_RS10490
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2 mM remove 2,214,616 + BWI76_RS10480 0.24 +0.8 2,214,725 + BWI76_RS10480 0.34 -0.7 2,214,753 + BWI76_RS10480 0.37 -0.3 2,214,787 - BWI76_RS10480 0.41 -0.1 2,214,854 - BWI76_RS10480 0.47 +0.6 2,214,915 + BWI76_RS10480 0.53 -0.4 2,214,923 - BWI76_RS10480 0.54 +0.7 2,214,941 + BWI76_RS10480 0.55 +0.1 2,214,978 + BWI76_RS10480 0.59 -0.7 2,215,011 + BWI76_RS10480 0.62 +0.2 2,215,029 + BWI76_RS10480 0.64 +0.1 2,215,037 - BWI76_RS10480 0.65 +0.2 2,215,037 - +1.9 2,215,197 + BWI76_RS10480 0.80 +0.1 2,215,358 + +0.1 2,215,464 - +0.8 2,215,566 + BWI76_RS10485 0.16 +1.0 2,215,611 - BWI76_RS10485 0.21 +0.1 2,216,066 + BWI76_RS10485 0.68 +0.1 2,216,201 + BWI76_RS10485 0.82 +0.8 2,216,552 + BWI76_RS10490 0.16 -0.2 2,216,552 + BWI76_RS10490 0.16 -0.6 2,216,560 - BWI76_RS10490 0.16 +0.5 2,216,841 - BWI76_RS10490 0.43 -0.1 2,216,881 + BWI76_RS10490 0.47 +1.6 2,217,254 + BWI76_RS10490 0.83 -0.1
Or see this region's nucleotide sequence