Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS09990

Experiment: copper (II) chloride 2 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS09985 and BWI76_RS09990 are separated by 17 nucleotidesBWI76_RS09990 and BWI76_RS09995 are separated by 122 nucleotides BWI76_RS09985: BWI76_RS09985 - membrane protein, at 2,101,229 to 2,103,364 _RS09985 BWI76_RS09990: BWI76_RS09990 - hypothetical protein, at 2,103,382 to 2,103,828 _RS09990 BWI76_RS09995: BWI76_RS09995 - DNA helicase IV, at 2,103,951 to 2,106,005 _RS09995 Position (kb) 2103 2104Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2102.435 kb on - strand, within BWI76_RS09985at 2102.470 kb on + strand, within BWI76_RS09985at 2102.531 kb on - strand, within BWI76_RS09985at 2102.648 kb on - strand, within BWI76_RS09985at 2102.727 kb on - strand, within BWI76_RS09985at 2102.770 kb on - strand, within BWI76_RS09985at 2102.780 kb on - strand, within BWI76_RS09985at 2102.856 kb on + strand, within BWI76_RS09985at 2103.116 kb on - strand, within BWI76_RS09985at 2103.247 kb on + strandat 2103.452 kb on - strand, within BWI76_RS09990at 2103.530 kb on - strand, within BWI76_RS09990at 2103.679 kb on - strand, within BWI76_RS09990at 2103.684 kb on - strand, within BWI76_RS09990at 2103.684 kb on - strand, within BWI76_RS09990at 2103.686 kb on - strand, within BWI76_RS09990at 2103.710 kb on - strand, within BWI76_RS09990at 2103.723 kb on - strand, within BWI76_RS09990at 2103.724 kb on - strand, within BWI76_RS09990at 2103.738 kb on + strand, within BWI76_RS09990at 2103.803 kb on - strandat 2103.834 kb on - strandat 2103.838 kb on + strandat 2103.846 kb on - strandat 2103.859 kb on + strandat 2103.867 kb on - strandat 2104.006 kb on + strandat 2104.162 kb on + strand, within BWI76_RS09995at 2104.205 kb on - strand, within BWI76_RS09995at 2104.536 kb on - strand, within BWI76_RS09995at 2104.760 kb on - strand, within BWI76_RS09995at 2104.788 kb on - strand, within BWI76_RS09995

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Per-strain Table

Position Strand Gene LocusTag Fraction copper (II) chloride 2 mM
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2,102,435 - BWI76_RS09985 0.56 -1.9
2,102,470 + BWI76_RS09985 0.58 -0.0
2,102,531 - BWI76_RS09985 0.61 +0.4
2,102,648 - BWI76_RS09985 0.66 -0.6
2,102,727 - BWI76_RS09985 0.70 -0.9
2,102,770 - BWI76_RS09985 0.72 -0.5
2,102,780 - BWI76_RS09985 0.73 +0.1
2,102,856 + BWI76_RS09985 0.76 +0.1
2,103,116 - BWI76_RS09985 0.88 +0.2
2,103,247 + +0.6
2,103,452 - BWI76_RS09990 0.16 +0.2
2,103,530 - BWI76_RS09990 0.33 +1.3
2,103,679 - BWI76_RS09990 0.66 +1.9
2,103,684 - BWI76_RS09990 0.68 +0.6
2,103,684 - BWI76_RS09990 0.68 +0.8
2,103,686 - BWI76_RS09990 0.68 +0.1
2,103,710 - BWI76_RS09990 0.73 +0.9
2,103,723 - BWI76_RS09990 0.76 -0.2
2,103,724 - BWI76_RS09990 0.77 +0.8
2,103,738 + BWI76_RS09990 0.80 -0.2
2,103,803 - -1.6
2,103,834 - +1.4
2,103,838 + +2.5
2,103,846 - +0.1
2,103,859 + +0.3
2,103,867 - +0.2
2,104,006 + -0.1
2,104,162 + BWI76_RS09995 0.10 -1.2
2,104,205 - BWI76_RS09995 0.12 -2.8
2,104,536 - BWI76_RS09995 0.28 +0.4
2,104,760 - BWI76_RS09995 0.39 -0.3
2,104,788 - BWI76_RS09995 0.41 +1.1

Or see this region's nucleotide sequence