Experiment: copper (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS09515 and BWI76_RS09520 are separated by 19 nucleotides BWI76_RS09520 and BWI76_RS09525 are separated by 227 nucleotides BWI76_RS09525 and BWI76_RS09530 are separated by 117 nucleotides BWI76_RS09530 and BWI76_RS09535 overlap by 4 nucleotides
BWI76_RS09515: BWI76_RS09515 - arginine ABC transporter substrate-binding protein, at 1,991,227 to 1,991,958
_RS09515
BWI76_RS09520: BWI76_RS09520 - arginine ABC transporter ATP-binding protein ArtP, at 1,991,978 to 1,992,706
_RS09520
BWI76_RS09525: BWI76_RS09525 - lipoprotein, at 1,992,934 to 1,993,449
_RS09525
BWI76_RS09530: BWI76_RS09530 - hypothetical protein, at 1,993,567 to 1,993,890
_RS09530
BWI76_RS09535: BWI76_RS09535 - N-acetylmuramoyl-L-alanine amidase amid, at 1,993,887 to 1,994,717
_RS09535
Position (kb) 1992
1993
1994 Strain fitness (log2 ratio) -1
0
1 at 1992.117 kb on + strand, within BWI76_RS09520 at 1992.383 kb on + strand, within BWI76_RS09520 at 1992.421 kb on - strand, within BWI76_RS09520 at 1992.655 kb on - strand at 1992.704 kb on + strand at 1992.704 kb on + strand at 1992.712 kb on - strand at 1992.983 kb on + strand at 1992.983 kb on - strand at 1993.013 kb on + strand, within BWI76_RS09525 at 1993.021 kb on - strand, within BWI76_RS09525 at 1993.026 kb on - strand, within BWI76_RS09525 at 1993.155 kb on + strand, within BWI76_RS09525 at 1993.417 kb on + strand at 1993.420 kb on - strand at 1993.425 kb on - strand at 1993.444 kb on - strand at 1993.498 kb on + strand at 1993.500 kb on + strand at 1993.533 kb on - strand at 1993.590 kb on + strand at 1993.597 kb on + strand at 1993.846 kb on + strand, within BWI76_RS09530 at 1993.990 kb on + strand, within BWI76_RS09535 at 1994.103 kb on - strand, within BWI76_RS09535 at 1994.244 kb on - strand, within BWI76_RS09535
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2 mM remove 1,992,117 + BWI76_RS09520 0.19 -1.2 1,992,383 + BWI76_RS09520 0.56 +0.1 1,992,421 - BWI76_RS09520 0.61 +0.7 1,992,655 - +0.1 1,992,704 + +0.9 1,992,704 + +0.5 1,992,712 - +0.4 1,992,983 + -0.5 1,992,983 - +0.0 1,993,013 + BWI76_RS09525 0.15 +0.0 1,993,021 - BWI76_RS09525 0.17 -0.2 1,993,026 - BWI76_RS09525 0.18 +0.7 1,993,155 + BWI76_RS09525 0.43 -0.1 1,993,417 + +0.1 1,993,420 - -0.7 1,993,425 - -0.0 1,993,444 - +0.1 1,993,498 + +0.3 1,993,500 + -0.9 1,993,533 - +0.2 1,993,590 + +0.6 1,993,597 + -0.4 1,993,846 + BWI76_RS09530 0.86 +0.1 1,993,990 + BWI76_RS09535 0.12 +0.1 1,994,103 - BWI76_RS09535 0.26 -0.5 1,994,244 - BWI76_RS09535 0.43 -0.3
Or see this region's nucleotide sequence