Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS06000

Experiment: copper (II) chloride 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 2 mM
1,258,192	-		BWI76_RS05995	0.64	+0.2
1,258,345	-		BWI76_RS05995	0.78	+3.1
1,258,384	+		BWI76_RS05995	0.81	+0.3
1,258,390	+		BWI76_RS05995	0.82	-0.8
1,258,420	+		BWI76_RS05995	0.84	+0.9
1,258,435	-		BWI76_RS05995	0.86	-0.2
1,258,439	+		BWI76_RS05995	0.86	-1.4
1,258,458	+		BWI76_RS05995	0.88	-1.3
1,258,467	+		BWI76_RS05995	0.88	+0.7
1,258,470	-		BWI76_RS05995	0.89	-2.0
1,258,470	-		BWI76_RS05995	0.89	+0.1
1,258,470	-		BWI76_RS05995	0.89	-0.5
1,258,477	+		BWI76_RS05995	0.89	+0.0
1,258,492	-				-0.1
1,258,504	-				-1.2
1,258,530	-				-0.5
1,258,533	-				-0.2
1,258,536	+				-0.6
1,258,536	+				-0.0
1,258,536	+				-0.4
1,258,536	+				-0.2
1,258,536	+				-0.7
1,258,544	-				+1.4
1,258,544	-				+0.5
1,258,544	-				-0.4
1,258,544	-				-0.2
1,258,544	-				-0.2
1,258,556	-				-0.2
1,258,603	+				+0.4
1,258,635	+				+0.9
1,258,635	+				+0.1
1,258,643	+				-0.3
1,258,684	+				-0.2
1,258,699	+				-0.7
1,258,702	-				-0.0
1,258,705	-				-0.1
1,258,740	-				-0.7
1,258,794	+				-0.1
1,258,794	+				-1.2
1,258,794	+				-0.9
1,258,794	+				+1.5
1,258,795	+				-0.2
1,258,796	+				+0.1
1,258,796	+				+0.6
1,258,796	+				-0.0
1,258,796	+				-1.5
1,258,796	+				+2.2
1,258,796	+				+1.5
1,258,796	+				-1.0
1,258,796	+				-0.6
1,258,796	+				+0.1
1,258,802	-				-0.7
1,258,802	-				+4.4
1,258,803	+				-0.2
1,258,803	+				-1.0
1,258,803	-				-0.6
1,258,804	-				-0.5
1,258,804	-				-0.8
1,258,804	-				-1.4
1,258,804	-				-0.3
1,258,804	-				-0.6
1,258,804	-				+0.2
1,258,804	-				+0.8
1,258,806	+				-0.2
1,258,806	+				-0.4
1,258,808	+				+2.5
1,258,808	+				-0.2
1,258,813	+				-0.3
1,258,814	-				-1.5
1,258,816	-				+0.2
1,258,816	-				-0.6
1,258,816	-				+0.6
1,258,816	-				-0.7
1,258,816	-				-0.0
1,258,818	+				+0.3
1,258,818	+				+0.5
1,258,818	+				+0.2
1,258,818	+				+0.1
1,258,818	+				-1.9
1,258,818	+				-0.4
1,258,818	+				+2.1
1,258,818	+				-0.6
1,258,818	+				+0.1
1,258,818	+				+0.7
1,258,818	+				+3.1
1,258,818	+				-0.7
1,258,818	+				-0.1
1,258,826	-				+0.8
1,258,826	-				-0.0
1,258,826	-				+0.2
1,258,826	-				+1.7
1,258,826	-				-1.5
1,258,826	-				-2.1
1,258,826	-				+0.7
1,258,826	-				-0.1
1,258,826	-				+1.8
1,258,826	-				+0.5
1,258,826	-				-1.2
1,258,826	-				-0.2
1,258,826	-				-0.1
1,258,826	-				+0.3
1,258,826	-				+0.4
1,258,826	-				+0.1
1,258,826	-				+0.4
1,258,826	-				-0.5
1,258,829	+				+0.5
1,258,854	+				-0.6
1,258,854	+				+0.3
1,258,854	+				-1.0
1,258,854	+				-0.0
1,258,860	+				+0.1
1,258,861	+				+0.1
1,258,862	-				-1.3
1,258,872	-				-2.6
1,258,877	-				-0.4
1,258,886	+				+0.8
1,258,894	-				-0.5
1,258,894	-				-0.1
1,258,894	-				-0.1
1,258,894	-				-0.0
1,258,894	-				-0.5
1,258,894	-				-2.4
1,258,894	-				-0.4
1,258,905	-				-0.5
1,258,905	-				+0.2
1,258,925	-				-0.6
1,258,984	-				-0.1
1,259,002	+				-1.0
1,259,002	+				-0.4
1,259,002	+				-1.2
1,259,002	+				-0.6
1,259,002	+				-1.7
1,259,002	+				+0.5
1,259,002	+				-0.0
1,259,002	+				-0.1
1,259,010	-				-1.3
1,259,010	-				-0.2
1,259,010	-				+0.0
1,259,010	-				-0.0
1,259,010	-				+0.3
1,259,010	-				-0.1
1,259,010	-				-3.1
1,259,022	+				+0.0
1,259,022	+				-0.3
1,259,035	+				-0.3
1,259,037	+				+0.1
1,259,040	-				-0.2
1,259,041	-				-2.1
1,259,043	-		BWI76_RS06000	0.10	+0.7
1,259,043	-		BWI76_RS06000	0.10	-1.2
1,259,043	-		BWI76_RS06000	0.10	-1.1
1,259,043	-		BWI76_RS06000	0.10	-1.2
1,259,043	-		BWI76_RS06000	0.10	-0.2
1,259,043	-		BWI76_RS06000	0.10	+0.1
1,259,045	-		BWI76_RS06000	0.10	-1.9
1,259,057	+		BWI76_RS06000	0.12	+0.3
1,259,057	+				+0.1
1,259,057	+		BWI76_RS06000	0.12	+0.3
1,259,060	-		BWI76_RS06000	0.12	-2.4
1,259,065	-		BWI76_RS06000	0.13	+0.2
1,259,065	-		BWI76_RS06000	0.13	-0.5
1,259,070	+		BWI76_RS06000	0.14	+0.9
1,259,078	-		BWI76_RS06000	0.15	+2.2
1,259,078	-		BWI76_RS06000	0.15	-0.4
1,259,078	-		BWI76_RS06000	0.15	-0.7
1,259,078	-				+3.1
1,259,078	-		BWI76_RS06000	0.15	-0.4
1,259,080	+		BWI76_RS06000	0.15	-0.1
1,259,080	+		BWI76_RS06000	0.15	-2.5
1,259,080	+		BWI76_RS06000	0.15	-0.2
1,259,080	+		BWI76_RS06000	0.15	-0.0
1,259,080	+		BWI76_RS06000	0.15	-0.3
1,259,080	+		BWI76_RS06000	0.15	-1.6
1,259,080	+		BWI76_RS06000	0.15	+0.5
1,259,080	+		BWI76_RS06000	0.15	+0.5
1,259,080	+		BWI76_RS06000	0.15	+0.1
1,259,088	-		BWI76_RS06000	0.16	-0.5
1,259,088	-		BWI76_RS06000	0.16	+0.0
1,259,088	-		BWI76_RS06000	0.16	-0.8
1,259,088	-		BWI76_RS06000	0.16	+1.2
1,259,095	+		BWI76_RS06000	0.17	+0.2
1,259,103	-		BWI76_RS06000	0.18	+0.7
1,259,109	-		BWI76_RS06000	0.19	-0.1
1,259,110	-		BWI76_RS06000	0.19	-1.0
1,259,153	-		BWI76_RS06000	0.24	-0.4
1,259,160	+		BWI76_RS06000	0.25	-0.2
1,259,183	-		BWI76_RS06000	0.28	+0.3
1,259,183	-		BWI76_RS06000	0.28	-0.2
1,259,184	+		BWI76_RS06000	0.28	+0.0
1,259,185	+		BWI76_RS06000	0.28	+1.5
1,259,193	-		BWI76_RS06000	0.29	+0.5
1,259,193	-		BWI76_RS06000	0.29	-0.5
1,259,193	-		BWI76_RS06000	0.29	-1.5
1,259,193	-		BWI76_RS06000	0.29	+0.9
1,259,203	-		BWI76_RS06000	0.31	-0.2
1,259,207	-		BWI76_RS06000	0.31	-1.9
1,259,241	+		BWI76_RS06000	0.36	+0.5
1,259,249	-		BWI76_RS06000	0.37	-0.1
1,259,249	-		BWI76_RS06000	0.37	+0.6
1,259,249	-		BWI76_RS06000	0.37	-1.0
1,259,249	-		BWI76_RS06000	0.37	-2.7
1,259,313	-		BWI76_RS06000	0.45	+0.1
1,259,350	-		BWI76_RS06000	0.50	+0.4
1,259,375	+		BWI76_RS06000	0.53	+0.1
1,259,385	+		BWI76_RS06000	0.54	+0.1
1,259,442	-		BWI76_RS06000	0.62	-0.7
1,259,662	+		BWI76_RS06000	0.90	+0.3
1,259,743	-				-0.4
1,259,964	+		BWI76_RS06005	0.16	-1.1
1,259,972	+		BWI76_RS06005	0.17	-0.2
1,260,012	-		BWI76_RS06005	0.20	-0.1
1,260,047	-		BWI76_RS06005	0.22	+1.2
1,260,261	-		BWI76_RS06005	0.38	-1.1
1,260,468	+		BWI76_RS06005	0.53	-0.1
1,260,500	-		BWI76_RS06005	0.55	+0.5
1,260,517	-		BWI76_RS06005	0.56	-0.2
1,260,517	-		BWI76_RS06005	0.56	-0.3
1,260,557	-		BWI76_RS06005	0.59	-0.2
1,260,578	+		BWI76_RS06005	0.61	-0.0
1,260,662	+		BWI76_RS06005	0.67	+0.2