Experiment: copper (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS04435 and BWI76_RS04440 are separated by 31 nucleotides BWI76_RS04440 and BWI76_RS04445 overlap by 4 nucleotides BWI76_RS04445 and BWI76_RS04450 are separated by 10 nucleotides
BWI76_RS04435: BWI76_RS04435 - [citrate (pro-3S)-lyase] ligase, at 916,335 to 917,363
_RS04435
BWI76_RS04440: BWI76_RS04440 - citrate lyase ACP, at 917,395 to 917,688
_RS04440
BWI76_RS04445: BWI76_RS04445 - citrate (pro-3S)-lyase subunit beta, at 917,685 to 918,554
_RS04445
BWI76_RS04450: BWI76_RS04450 - citrate lyase subunit alpha, at 918,565 to 920,091
_RS04450
Position (kb) 917
918 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 916.397 kb on + strand at 916.398 kb on - strand at 916.418 kb on + strand at 916.418 kb on + strand at 916.426 kb on - strand at 916.438 kb on + strand, within BWI76_RS04435 at 916.461 kb on + strand, within BWI76_RS04435 at 916.503 kb on + strand, within BWI76_RS04435 at 916.503 kb on + strand, within BWI76_RS04435 at 916.526 kb on - strand, within BWI76_RS04435 at 916.552 kb on + strand, within BWI76_RS04435 at 916.552 kb on + strand, within BWI76_RS04435 at 916.560 kb on - strand, within BWI76_RS04435 at 916.560 kb on - strand, within BWI76_RS04435 at 916.565 kb on + strand, within BWI76_RS04435 at 916.571 kb on + strand, within BWI76_RS04435 at 916.585 kb on + strand, within BWI76_RS04435 at 916.830 kb on - strand, within BWI76_RS04435 at 917.148 kb on - strand, within BWI76_RS04435 at 917.237 kb on + strand, within BWI76_RS04435 at 917.418 kb on + strand at 917.461 kb on - strand, within BWI76_RS04440 at 917.559 kb on + strand, within BWI76_RS04440 at 917.615 kb on - strand, within BWI76_RS04440 at 917.653 kb on + strand, within BWI76_RS04440 at 917.759 kb on - strand at 917.935 kb on + strand, within BWI76_RS04445 at 918.031 kb on + strand, within BWI76_RS04445 at 918.031 kb on + strand, within BWI76_RS04445 at 918.046 kb on + strand, within BWI76_RS04445 at 918.379 kb on - strand, within BWI76_RS04445 at 918.454 kb on + strand, within BWI76_RS04445 at 918.527 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2 mM remove 916,397 + +0.2 916,398 - +1.6 916,418 + +0.5 916,418 + -0.4 916,426 - -0.7 916,438 + BWI76_RS04435 0.10 +1.5 916,461 + BWI76_RS04435 0.12 +0.2 916,503 + BWI76_RS04435 0.16 +0.1 916,503 + BWI76_RS04435 0.16 +0.3 916,526 - BWI76_RS04435 0.19 +1.1 916,552 + BWI76_RS04435 0.21 -0.3 916,552 + BWI76_RS04435 0.21 +0.3 916,560 - BWI76_RS04435 0.22 +0.4 916,560 - BWI76_RS04435 0.22 -3.0 916,565 + BWI76_RS04435 0.22 -0.3 916,571 + BWI76_RS04435 0.23 +1.5 916,585 + BWI76_RS04435 0.24 -0.2 916,830 - BWI76_RS04435 0.48 +0.0 917,148 - BWI76_RS04435 0.79 +0.2 917,237 + BWI76_RS04435 0.88 -0.2 917,418 + +0.5 917,461 - BWI76_RS04440 0.22 +0.3 917,559 + BWI76_RS04440 0.56 +0.9 917,615 - BWI76_RS04440 0.75 +0.6 917,653 + BWI76_RS04440 0.88 +0.6 917,759 - -0.2 917,935 + BWI76_RS04445 0.29 -0.1 918,031 + BWI76_RS04445 0.40 +0.4 918,031 + BWI76_RS04445 0.40 +0.4 918,046 + BWI76_RS04445 0.41 +1.4 918,379 - BWI76_RS04445 0.80 -0.1 918,454 + BWI76_RS04445 0.88 +0.9 918,527 - -0.7
Or see this region's nucleotide sequence