Experiment: copper (II) chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS04105 and BWI76_RS04110 are separated by 123 nucleotides BWI76_RS04110 and BWI76_RS04115 are separated by 120 nucleotides BWI76_RS04115 and BWI76_RS04120 overlap by 4 nucleotides BWI76_RS04120 and BWI76_RS04125 are separated by 145 nucleotides
BWI76_RS04105: BWI76_RS04105 - molecular chaperone OsmY, at 844,864 to 845,475
_RS04105
BWI76_RS04110: BWI76_RS04110 - DUF1328 domain-containing protein, at 845,599 to 845,760
_RS04110
BWI76_RS04115: BWI76_RS04115 - patatin family protein, at 845,881 to 846,954
_RS04115
BWI76_RS04120: BWI76_RS04120 - metal-dependent hydrolase, at 846,951 to 847,730
_RS04120
BWI76_RS04125: BWI76_RS04125 - NupC/NupG family nucleoside CNT transporter, at 847,876 to 849,153
_RS04125
Position (kb) 845
846
847 Strain fitness (log2 ratio) -1
0
1
2 at 844.899 kb on - strand at 844.923 kb on - strand at 844.951 kb on + strand, within BWI76_RS04105 at 844.951 kb on + strand, within BWI76_RS04105 at 844.951 kb on + strand, within BWI76_RS04105 at 844.959 kb on - strand, within BWI76_RS04105 at 845.063 kb on - strand, within BWI76_RS04105 at 845.063 kb on - strand, within BWI76_RS04105 at 845.097 kb on + strand, within BWI76_RS04105 at 845.133 kb on - strand, within BWI76_RS04105 at 845.141 kb on + strand, within BWI76_RS04105 at 845.259 kb on + strand, within BWI76_RS04105 at 845.368 kb on - strand, within BWI76_RS04105 at 845.385 kb on - strand, within BWI76_RS04105 at 845.409 kb on + strand, within BWI76_RS04105 at 845.436 kb on - strand at 845.527 kb on + strand at 845.527 kb on + strand at 845.527 kb on + strand at 845.527 kb on - strand at 845.535 kb on - strand at 845.535 kb on - strand at 845.540 kb on - strand at 845.582 kb on + strand at 845.589 kb on + strand at 845.590 kb on - strand at 845.647 kb on + strand, within BWI76_RS04110 at 845.655 kb on - strand, within BWI76_RS04110 at 845.657 kb on + strand, within BWI76_RS04110 at 845.667 kb on + strand, within BWI76_RS04110 at 845.687 kb on - strand, within BWI76_RS04110 at 845.711 kb on + strand, within BWI76_RS04110 at 845.763 kb on - strand at 845.907 kb on + strand at 845.912 kb on + strand at 845.951 kb on + strand at 845.959 kb on - strand at 845.959 kb on - strand at 845.964 kb on - strand at 845.971 kb on + strand at 845.980 kb on - strand at 846.420 kb on - strand, within BWI76_RS04115 at 846.514 kb on + strand, within BWI76_RS04115 at 846.519 kb on + strand, within BWI76_RS04115 at 846.521 kb on + strand, within BWI76_RS04115 at 846.527 kb on - strand, within BWI76_RS04115 at 846.633 kb on - strand, within BWI76_RS04115 at 846.711 kb on - strand, within BWI76_RS04115 at 846.711 kb on - strand, within BWI76_RS04115 at 846.746 kb on - strand, within BWI76_RS04115 at 847.035 kb on + strand, within BWI76_RS04120 at 847.188 kb on - strand, within BWI76_RS04120 at 847.211 kb on + strand, within BWI76_RS04120 at 847.559 kb on + strand, within BWI76_RS04120 at 847.575 kb on - strand, within BWI76_RS04120 at 847.615 kb on + strand, within BWI76_RS04120 at 847.615 kb on + strand at 847.840 kb on + strand at 847.840 kb on + strand at 847.840 kb on + strand at 847.848 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2 mM remove 844,899 - -0.0 844,923 - +1.1 844,951 + BWI76_RS04105 0.14 +0.2 844,951 + BWI76_RS04105 0.14 +0.5 844,951 + BWI76_RS04105 0.14 +1.3 844,959 - BWI76_RS04105 0.16 +0.3 845,063 - BWI76_RS04105 0.33 +0.6 845,063 - BWI76_RS04105 0.33 -0.8 845,097 + BWI76_RS04105 0.38 -0.1 845,133 - BWI76_RS04105 0.44 +0.1 845,141 + BWI76_RS04105 0.45 -0.0 845,259 + BWI76_RS04105 0.65 -0.1 845,368 - BWI76_RS04105 0.82 -1.1 845,385 - BWI76_RS04105 0.85 -0.1 845,409 + BWI76_RS04105 0.89 -0.1 845,436 - +0.4 845,527 + +0.1 845,527 + -1.6 845,527 + +0.0 845,527 - +0.4 845,535 - -0.7 845,535 - -0.1 845,540 - +0.2 845,582 + -0.7 845,589 + +2.5 845,590 - -1.5 845,647 + BWI76_RS04110 0.30 +0.2 845,655 - BWI76_RS04110 0.35 +0.1 845,657 + BWI76_RS04110 0.36 +0.4 845,667 + BWI76_RS04110 0.42 -0.5 845,687 - BWI76_RS04110 0.54 +1.1 845,711 + BWI76_RS04110 0.69 -0.1 845,763 - -1.2 845,907 + -0.2 845,912 + +0.1 845,951 + -0.3 845,959 - -0.1 845,959 - +0.3 845,964 - +0.4 845,971 + +1.0 845,980 - +0.8 846,420 - BWI76_RS04115 0.50 +0.8 846,514 + BWI76_RS04115 0.59 -0.0 846,519 + BWI76_RS04115 0.59 +0.8 846,521 + BWI76_RS04115 0.60 +0.4 846,527 - BWI76_RS04115 0.60 +0.8 846,633 - BWI76_RS04115 0.70 +0.1 846,711 - BWI76_RS04115 0.77 +1.2 846,711 - BWI76_RS04115 0.77 +0.5 846,746 - BWI76_RS04115 0.81 -1.5 847,035 + BWI76_RS04120 0.11 +0.5 847,188 - BWI76_RS04120 0.30 -0.1 847,211 + BWI76_RS04120 0.33 -0.9 847,559 + BWI76_RS04120 0.78 +0.2 847,575 - BWI76_RS04120 0.80 +0.3 847,615 + BWI76_RS04120 0.85 +0.0 847,615 + +1.1 847,840 + -0.1 847,840 + -0.0 847,840 + +0.6 847,848 - +0.1
Or see this region's nucleotide sequence