Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS01785

Experiment: copper (II) chloride 2 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS01780 and BWI76_RS01785 are separated by 5 nucleotidesBWI76_RS01785 and BWI76_RS01790 are separated by 38 nucleotides BWI76_RS01780: BWI76_RS01780 - SPFH domain / Band 7 family protein, at 363,171 to 364,298 _RS01780 BWI76_RS01785: BWI76_RS01785 - nucleotidyltransferase, at 364,304 to 365,092 _RS01785 BWI76_RS01790: BWI76_RS01790 - lysine-sensitive aspartokinase 3, at 365,131 to 366,480 _RS01790 Position (kb) 364 365 366Strain fitness (log2 ratio) -1 0 1 2at 363.374 kb on + strand, within BWI76_RS01780at 363.377 kb on - strand, within BWI76_RS01780at 363.419 kb on - strand, within BWI76_RS01780at 363.521 kb on + strand, within BWI76_RS01780at 363.617 kb on + strand, within BWI76_RS01780at 363.635 kb on + strand, within BWI76_RS01780at 363.974 kb on + strand, within BWI76_RS01780at 364.030 kb on + strand, within BWI76_RS01780at 364.049 kb on + strand, within BWI76_RS01780at 364.122 kb on - strand, within BWI76_RS01780at 364.145 kb on + strand, within BWI76_RS01780at 364.211 kb on + strandat 364.216 kb on + strandat 364.216 kb on + strandat 364.454 kb on - strand, within BWI76_RS01785at 364.515 kb on + strand, within BWI76_RS01785at 364.854 kb on + strand, within BWI76_RS01785at 364.923 kb on - strand, within BWI76_RS01785at 364.928 kb on - strand, within BWI76_RS01785at 364.986 kb on + strand, within BWI76_RS01785at 364.996 kb on + strand, within BWI76_RS01785at 365.004 kb on - strand, within BWI76_RS01785at 365.065 kb on + strandat 365.273 kb on - strand, within BWI76_RS01790at 365.344 kb on - strand, within BWI76_RS01790at 365.381 kb on - strand, within BWI76_RS01790at 365.450 kb on - strand, within BWI76_RS01790at 365.481 kb on - strand, within BWI76_RS01790at 365.539 kb on + strand, within BWI76_RS01790at 365.547 kb on - strand, within BWI76_RS01790at 365.661 kb on + strand, within BWI76_RS01790at 365.689 kb on - strand, within BWI76_RS01790at 365.694 kb on - strand, within BWI76_RS01790at 365.790 kb on + strand, within BWI76_RS01790at 365.860 kb on - strand, within BWI76_RS01790at 365.908 kb on + strand, within BWI76_RS01790at 365.916 kb on - strand, within BWI76_RS01790at 365.916 kb on - strand, within BWI76_RS01790

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Per-strain Table

Position Strand Gene LocusTag Fraction copper (II) chloride 2 mM
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363,374 + BWI76_RS01780 0.18 +0.1
363,377 - BWI76_RS01780 0.18 -0.3
363,419 - BWI76_RS01780 0.22 +0.2
363,521 + BWI76_RS01780 0.31 +0.3
363,617 + BWI76_RS01780 0.40 +0.4
363,635 + BWI76_RS01780 0.41 +2.0
363,974 + BWI76_RS01780 0.71 +0.1
364,030 + BWI76_RS01780 0.76 +0.8
364,049 + BWI76_RS01780 0.78 +1.6
364,122 - BWI76_RS01780 0.84 -1.4
364,145 + BWI76_RS01780 0.86 +0.0
364,211 + +0.0
364,216 + -1.1
364,216 + +1.0
364,454 - BWI76_RS01785 0.19 +0.6
364,515 + BWI76_RS01785 0.27 +1.2
364,854 + BWI76_RS01785 0.70 +2.5
364,923 - BWI76_RS01785 0.78 +1.6
364,928 - BWI76_RS01785 0.79 -0.5
364,986 + BWI76_RS01785 0.86 -0.4
364,996 + BWI76_RS01785 0.88 +0.6
365,004 - BWI76_RS01785 0.89 +0.4
365,065 + -0.2
365,273 - BWI76_RS01790 0.11 +0.2
365,344 - BWI76_RS01790 0.16 -0.6
365,381 - BWI76_RS01790 0.19 -0.3
365,450 - BWI76_RS01790 0.24 +0.2
365,481 - BWI76_RS01790 0.26 +0.2
365,539 + BWI76_RS01790 0.30 +0.6
365,547 - BWI76_RS01790 0.31 +0.3
365,661 + BWI76_RS01790 0.39 +0.1
365,689 - BWI76_RS01790 0.41 +0.2
365,694 - BWI76_RS01790 0.42 -0.2
365,790 + BWI76_RS01790 0.49 +0.4
365,860 - BWI76_RS01790 0.54 +0.5
365,908 + BWI76_RS01790 0.58 -0.2
365,916 - BWI76_RS01790 0.58 +0.9
365,916 - BWI76_RS01790 0.58 +0.2

Or see this region's nucleotide sequence