Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS01290

Experiment: copper (II) chloride 2 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS01280 and BWI76_RS01285 are separated by 165 nucleotidesBWI76_RS01285 and BWI76_RS01290 are separated by 3 nucleotidesBWI76_RS01290 and BWI76_RS01295 are separated by 267 nucleotides BWI76_RS01280: BWI76_RS01280 - 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase, at 261,981 to 264,242 _RS01280 BWI76_RS01285: BWI76_RS01285 - amino acid ABC transporter substrate-binding protein, at 264,408 to 265,097 _RS01285 BWI76_RS01290: BWI76_RS01290 - putative dienelactone hydrolase, at 265,101 to 265,913 _RS01290 BWI76_RS01295: BWI76_RS01295 - Uridine phosphorylase (EC 2.4.2.3) (from data), at 266,181 to 266,942 _RS01295 Position (kb) 265 266Strain fitness (log2 ratio) -2 -1 0 1at 264.104 kb on + strandat 264.142 kb on + strandat 264.217 kb on - strandat 264.217 kb on - strandat 264.217 kb on - strandat 264.319 kb on - strandat 264.367 kb on - strandat 264.448 kb on + strandat 264.505 kb on + strand, within BWI76_RS01285at 264.568 kb on - strand, within BWI76_RS01285at 264.662 kb on - strand, within BWI76_RS01285at 264.761 kb on - strand, within BWI76_RS01285at 264.958 kb on + strand, within BWI76_RS01285at 264.992 kb on + strand, within BWI76_RS01285at 265.007 kb on - strand, within BWI76_RS01285at 265.060 kb on - strandat 265.099 kb on - strandat 265.132 kb on - strandat 265.279 kb on + strand, within BWI76_RS01290at 265.420 kb on + strand, within BWI76_RS01290at 265.420 kb on + strand, within BWI76_RS01290at 265.444 kb on + strand, within BWI76_RS01290at 265.468 kb on + strand, within BWI76_RS01290at 265.545 kb on - strand, within BWI76_RS01290at 265.846 kb on - strandat 265.961 kb on + strandat 265.961 kb on + strandat 266.033 kb on - strandat 266.233 kb on + strandat 266.251 kb on + strandat 266.354 kb on - strand, within BWI76_RS01295at 266.362 kb on - strandat 266.423 kb on + strand, within BWI76_RS01295at 266.533 kb on + strand, within BWI76_RS01295at 266.600 kb on + strand, within BWI76_RS01295at 266.600 kb on + strand, within BWI76_RS01295at 266.670 kb on - strand, within BWI76_RS01295at 266.678 kb on + strand, within BWI76_RS01295

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Per-strain Table

Position Strand Gene LocusTag Fraction copper (II) chloride 2 mM
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264,104 + -0.0
264,142 + +0.1
264,217 - +0.1
264,217 - +0.1
264,217 - -2.7
264,319 - +0.2
264,367 - +0.5
264,448 + +0.7
264,505 + BWI76_RS01285 0.14 +0.3
264,568 - BWI76_RS01285 0.23 -0.5
264,662 - BWI76_RS01285 0.37 -1.0
264,761 - BWI76_RS01285 0.51 -0.7
264,958 + BWI76_RS01285 0.80 +0.9
264,992 + BWI76_RS01285 0.85 -0.3
265,007 - BWI76_RS01285 0.87 +0.9
265,060 - -0.6
265,099 - -0.0
265,132 - -0.5
265,279 + BWI76_RS01290 0.22 -0.1
265,420 + BWI76_RS01290 0.39 +0.4
265,420 + BWI76_RS01290 0.39 +0.5
265,444 + BWI76_RS01290 0.42 +1.5
265,468 + BWI76_RS01290 0.45 +0.7
265,545 - BWI76_RS01290 0.55 -0.4
265,846 - -0.1
265,961 + -0.1
265,961 + -0.2
266,033 - +0.4
266,233 + -0.2
266,251 + +0.4
266,354 - BWI76_RS01295 0.23 +0.3
266,362 - +0.2
266,423 + BWI76_RS01295 0.32 -0.3
266,533 + BWI76_RS01295 0.46 -0.2
266,600 + BWI76_RS01295 0.55 -0.3
266,600 + BWI76_RS01295 0.55 +0.1
266,670 - BWI76_RS01295 0.64 -0.0
266,678 + BWI76_RS01295 0.65 +0.4

Or see this region's nucleotide sequence