Experiment: 4C survival; 360 hrs
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_24830 and AO356_24835 are separated by 110 nucleotides AO356_24835 and AO356_24840 are separated by 17 nucleotides AO356_24840 and AO356_24845 are separated by 586 nucleotides
AO356_24830: AO356_24830 - hypothetical protein, at 5,628,120 to 5,628,881
_24830
AO356_24835: AO356_24835 - DoxX family protein, at 5,628,992 to 5,629,498
_24835
AO356_24840: AO356_24840 - hypothetical protein, at 5,629,516 to 5,630,148
_24840
AO356_24845: AO356_24845 - ATPase, at 5,630,735 to 5,632,045
_24845
Position (kb) 5629
5630
5631 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5628.577 kb on - strand, within AO356_24830 at 5628.591 kb on + strand, within AO356_24830 at 5628.592 kb on - strand, within AO356_24830 at 5628.732 kb on + strand, within AO356_24830 at 5628.732 kb on + strand, within AO356_24830 at 5628.921 kb on + strand at 5628.922 kb on - strand at 5629.089 kb on + strand, within AO356_24835 at 5629.090 kb on - strand, within AO356_24835 at 5629.090 kb on - strand, within AO356_24835 at 5629.090 kb on - strand, within AO356_24835 at 5629.617 kb on - strand, within AO356_24840 at 5629.680 kb on + strand, within AO356_24840 at 5629.768 kb on + strand, within AO356_24840 at 5629.768 kb on + strand, within AO356_24840 at 5629.768 kb on + strand, within AO356_24840 at 5629.768 kb on + strand, within AO356_24840 at 5629.772 kb on + strand, within AO356_24840 at 5629.841 kb on + strand, within AO356_24840 at 5629.842 kb on - strand, within AO356_24840 at 5629.848 kb on - strand, within AO356_24840 at 5629.848 kb on - strand, within AO356_24840 at 5629.848 kb on - strand, within AO356_24840 at 5630.150 kb on + strand at 5630.150 kb on + strand at 5630.150 kb on + strand at 5630.150 kb on + strand at 5630.150 kb on + strand at 5630.262 kb on + strand at 5630.262 kb on + strand at 5630.263 kb on - strand at 5630.291 kb on + strand at 5630.291 kb on + strand at 5630.292 kb on - strand at 5630.292 kb on - strand at 5630.292 kb on - strand at 5630.292 kb on - strand at 5630.292 kb on - strand at 5630.314 kb on + strand at 5630.555 kb on - strand at 5631.126 kb on + strand, within AO356_24845
Per-strain Table
Position Strand Gene LocusTag Fraction 4C survival; 360 hrs remove 5,628,577 - AO356_24830 0.60 -0.3 5,628,591 + AO356_24830 0.62 +0.8 5,628,592 - AO356_24830 0.62 -0.2 5,628,732 + AO356_24830 0.80 +0.3 5,628,732 + AO356_24830 0.80 +0.6 5,628,921 + -0.1 5,628,922 - +0.2 5,629,089 + AO356_24835 0.19 +0.9 5,629,090 - AO356_24835 0.19 +0.1 5,629,090 - AO356_24835 0.19 -0.4 5,629,090 - AO356_24835 0.19 -0.6 5,629,617 - AO356_24840 0.16 +2.1 5,629,680 + AO356_24840 0.26 -0.2 5,629,768 + AO356_24840 0.40 -1.6 5,629,768 + AO356_24840 0.40 +0.7 5,629,768 + AO356_24840 0.40 -0.0 5,629,768 + AO356_24840 0.40 +0.5 5,629,772 + AO356_24840 0.40 -0.0 5,629,841 + AO356_24840 0.51 +0.7 5,629,842 - AO356_24840 0.52 +0.3 5,629,848 - AO356_24840 0.52 +0.1 5,629,848 - AO356_24840 0.52 +1.0 5,629,848 - AO356_24840 0.52 -0.0 5,630,150 + -0.5 5,630,150 + +1.1 5,630,150 + +0.1 5,630,150 + -1.0 5,630,150 + -1.6 5,630,262 + -0.5 5,630,262 + -1.6 5,630,263 - -0.9 5,630,291 + -0.7 5,630,291 + +0.9 5,630,292 - -0.0 5,630,292 - +1.1 5,630,292 - +0.3 5,630,292 - -0.2 5,630,292 - +0.4 5,630,314 + +1.2 5,630,555 - -0.7 5,631,126 + AO356_24845 0.30 -1.9
Or see this region's nucleotide sequence