Experiment: 4C survival; 360 hrs
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_01425 and AO356_01430 are separated by 13 nucleotides AO356_01430 and AO356_01435 are separated by 142 nucleotides
AO356_01425: AO356_01425 - LysR family transcriptional regulator, at 326,848 to 327,780
_01425
AO356_01430: AO356_01430 - NADP oxidoreductase, at 327,794 to 328,396
_01430
AO356_01435: AO356_01435 - LysR family transcriptional regulator, at 328,539 to 329,468
_01435
Position (kb) 327
328
329 Strain fitness (log2 ratio) -2
-1
0
1 at 327.203 kb on + strand, within AO356_01425 at 327.203 kb on + strand, within AO356_01425 at 327.204 kb on - strand, within AO356_01425 at 327.253 kb on + strand, within AO356_01425 at 327.254 kb on - strand, within AO356_01425 at 327.374 kb on - strand, within AO356_01425 at 327.436 kb on + strand, within AO356_01425 at 327.437 kb on - strand, within AO356_01425 at 327.437 kb on - strand, within AO356_01425 at 327.437 kb on - strand, within AO356_01425 at 327.437 kb on - strand, within AO356_01425 at 327.499 kb on + strand, within AO356_01425 at 327.644 kb on - strand, within AO356_01425 at 327.881 kb on + strand, within AO356_01430 at 327.882 kb on - strand, within AO356_01430 at 328.316 kb on + strand, within AO356_01430 at 328.316 kb on + strand, within AO356_01430 at 328.316 kb on + strand, within AO356_01430 at 328.317 kb on - strand, within AO356_01430 at 328.317 kb on - strand, within AO356_01430 at 328.317 kb on - strand, within AO356_01430 at 328.428 kb on + strand at 328.521 kb on + strand at 328.521 kb on + strand at 328.521 kb on + strand at 328.522 kb on - strand at 328.525 kb on - strand at 328.858 kb on + strand, within AO356_01435 at 329.049 kb on + strand, within AO356_01435 at 329.328 kb on + strand, within AO356_01435 at 329.328 kb on + strand, within AO356_01435 at 329.328 kb on + strand, within AO356_01435 at 329.328 kb on + strand, within AO356_01435 at 329.329 kb on - strand, within AO356_01435 at 329.329 kb on - strand, within AO356_01435 at 329.329 kb on - strand, within AO356_01435 at 329.356 kb on - strand, within AO356_01435 at 329.356 kb on - strand, within AO356_01435 at 329.358 kb on + strand, within AO356_01435 at 329.359 kb on - strand, within AO356_01435 at 329.359 kb on - strand, within AO356_01435
Per-strain Table
Position Strand Gene LocusTag Fraction 4C survival; 360 hrs remove 327,203 + AO356_01425 0.38 -0.1 327,203 + AO356_01425 0.38 -0.4 327,204 - AO356_01425 0.38 +0.0 327,253 + AO356_01425 0.43 +0.1 327,254 - AO356_01425 0.44 +0.9 327,374 - AO356_01425 0.56 -0.6 327,436 + AO356_01425 0.63 -0.1 327,437 - AO356_01425 0.63 -0.6 327,437 - AO356_01425 0.63 -0.9 327,437 - AO356_01425 0.63 -1.9 327,437 - AO356_01425 0.63 -0.5 327,499 + AO356_01425 0.70 +0.9 327,644 - AO356_01425 0.85 -0.6 327,881 + AO356_01430 0.14 -0.7 327,882 - AO356_01430 0.15 +0.8 328,316 + AO356_01430 0.87 +1.0 328,316 + AO356_01430 0.87 -0.2 328,316 + AO356_01430 0.87 +0.2 328,317 - AO356_01430 0.87 -0.7 328,317 - AO356_01430 0.87 +0.7 328,317 - AO356_01430 0.87 -0.6 328,428 + +0.9 328,521 + -0.4 328,521 + +0.3 328,521 + +0.1 328,522 - +1.0 328,525 - +0.3 328,858 + AO356_01435 0.34 +0.1 329,049 + AO356_01435 0.55 +0.9 329,328 + AO356_01435 0.85 -1.0 329,328 + AO356_01435 0.85 -0.1 329,328 + AO356_01435 0.85 +0.6 329,328 + AO356_01435 0.85 -0.7 329,329 - AO356_01435 0.85 -0.3 329,329 - AO356_01435 0.85 -0.1 329,329 - AO356_01435 0.85 +0.4 329,356 - AO356_01435 0.88 -0.5 329,356 - AO356_01435 0.88 +0.2 329,358 + AO356_01435 0.88 +0.4 329,359 - AO356_01435 0.88 -0.1 329,359 - AO356_01435 0.88 -0.8
Or see this region's nucleotide sequence