Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_16525 and AO353_16530 are separated by 17 nucleotides AO353_16530 and AO353_16535 are separated by 76 nucleotides AO353_16535 and AO353_16540 are separated by 153 nucleotides
AO353_16525: AO353_16525 - lipid-A-disaccharide synthase, at 3,668,657 to 3,669,790
_16525
AO353_16530: AO353_16530 - ribonuclease HII, at 3,669,808 to 3,670,428
_16530
AO353_16535: AO353_16535 - DNA polymerase III subunit alpha, at 3,670,505 to 3,674,026
_16535
AO353_16540: AO353_16540 - acetyl-CoA carboxylase subunit alpha, at 3,674,180 to 3,675,127
_16540
Position (kb)
3670
3671
3672
3673
3674
3675 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3669.797 kb on + strand at 3669.797 kb on + strand at 3669.797 kb on + strand at 3669.797 kb on + strand at 3669.798 kb on - strand at 3669.798 kb on - strand at 3669.798 kb on - strand at 3669.798 kb on - strand at 3669.798 kb on - strand at 3669.798 kb on - strand at 3669.823 kb on - strand at 3669.989 kb on - strand, within AO353_16530 at 3670.062 kb on + strand, within AO353_16530 at 3670.063 kb on - strand, within AO353_16530 at 3670.396 kb on + strand at 3670.396 kb on + strand at 3670.396 kb on + strand at 3670.396 kb on + strand at 3670.397 kb on - strand at 3670.397 kb on - strand at 3670.397 kb on - strand at 3670.397 kb on - strand at 3670.397 kb on - strand at 3670.426 kb on + strand at 3670.426 kb on + strand at 3670.426 kb on + strand at 3670.426 kb on + strand at 3670.426 kb on + strand at 3670.426 kb on + strand at 3670.426 kb on + strand at 3670.427 kb on - strand at 3670.427 kb on - strand at 3670.427 kb on - strand at 3670.427 kb on - strand at 3670.461 kb on - strand at 3674.045 kb on + strand at 3674.083 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 3,669,797 + -0.7 3,669,797 + -0.4 3,669,797 + +0.7 3,669,797 + -0.0 3,669,798 - +0.2 3,669,798 - +0.1 3,669,798 - +0.7 3,669,798 - -0.5 3,669,798 - -2.0 3,669,798 - -0.8 3,669,823 - +0.1 3,669,989 - AO353_16530 0.29 +1.2 3,670,062 + AO353_16530 0.41 +1.4 3,670,063 - AO353_16530 0.41 +1.1 3,670,396 + +0.9 3,670,396 + -0.8 3,670,396 + +0.7 3,670,396 + -0.1 3,670,397 - +0.8 3,670,397 - +0.2 3,670,397 - -0.5 3,670,397 - -1.1 3,670,397 - -1.7 3,670,426 + -0.2 3,670,426 + -0.7 3,670,426 + -1.1 3,670,426 + -0.4 3,670,426 + +2.1 3,670,426 + +0.7 3,670,426 + -0.7 3,670,427 - +1.2 3,670,427 - -0.5 3,670,427 - +0.3 3,670,427 - +0.1 3,670,461 - -0.5 3,674,045 + +0.2 3,674,083 + -1.9
Or see this region's nucleotide sequence