Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_16220 and AO353_16225 are separated by 181 nucleotides AO353_16225 and AO353_16230 overlap by 11 nucleotides
AO353_16220: AO353_16220 - alpha/beta hydrolase, at 3,600,911 to 3,601,945
_16220
AO353_16225: AO353_16225 - Fis family transcriptional regulator, at 3,602,127 to 3,603,524
_16225
AO353_16230: AO353_16230 - histidine kinase, at 3,603,514 to 3,605,292
_16230
Position (kb)
3602
3603
3604 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3601.247 kb on + strand, within AO353_16220 at 3601.277 kb on + strand, within AO353_16220 at 3601.278 kb on - strand, within AO353_16220 at 3601.613 kb on + strand, within AO353_16220 at 3601.613 kb on + strand, within AO353_16220 at 3601.613 kb on + strand, within AO353_16220 at 3601.613 kb on + strand, within AO353_16220 at 3601.614 kb on - strand, within AO353_16220 at 3601.729 kb on + strand, within AO353_16220 at 3601.871 kb on + strand at 3601.943 kb on + strand at 3601.943 kb on + strand at 3601.943 kb on + strand at 3601.944 kb on - strand at 3601.944 kb on - strand at 3601.944 kb on - strand at 3602.027 kb on - strand at 3602.036 kb on + strand at 3602.036 kb on + strand at 3602.037 kb on - strand at 3602.037 kb on - strand at 3602.258 kb on - strand at 3602.258 kb on - strand at 3602.258 kb on - strand at 3602.258 kb on - strand at 3602.313 kb on + strand, within AO353_16225 at 3602.313 kb on + strand, within AO353_16225 at 3602.365 kb on + strand, within AO353_16225 at 3602.365 kb on + strand, within AO353_16225 at 3602.365 kb on + strand, within AO353_16225 at 3602.365 kb on + strand, within AO353_16225 at 3602.365 kb on + strand, within AO353_16225 at 3602.365 kb on + strand, within AO353_16225 at 3602.366 kb on - strand, within AO353_16225 at 3602.366 kb on - strand, within AO353_16225 at 3602.366 kb on - strand, within AO353_16225 at 3602.366 kb on - strand, within AO353_16225 at 3602.366 kb on - strand, within AO353_16225 at 3602.366 kb on - strand, within AO353_16225 at 3602.373 kb on + strand, within AO353_16225 at 3602.373 kb on + strand, within AO353_16225 at 3602.373 kb on + strand, within AO353_16225 at 3602.373 kb on + strand, within AO353_16225 at 3602.374 kb on - strand, within AO353_16225 at 3602.374 kb on - strand, within AO353_16225 at 3602.374 kb on - strand, within AO353_16225 at 3602.374 kb on - strand, within AO353_16225 at 3602.374 kb on - strand, within AO353_16225 at 3602.374 kb on - strand, within AO353_16225 at 3602.374 kb on - strand, within AO353_16225 at 3602.464 kb on + strand, within AO353_16225 at 3602.464 kb on + strand, within AO353_16225 at 3602.465 kb on - strand, within AO353_16225 at 3602.465 kb on - strand, within AO353_16225 at 3602.623 kb on + strand, within AO353_16225 at 3602.623 kb on + strand, within AO353_16225 at 3602.623 kb on + strand, within AO353_16225 at 3602.623 kb on + strand, within AO353_16225 at 3602.623 kb on + strand, within AO353_16225 at 3602.623 kb on + strand, within AO353_16225 at 3602.623 kb on + strand, within AO353_16225 at 3602.624 kb on - strand, within AO353_16225 at 3602.624 kb on - strand, within AO353_16225 at 3602.624 kb on - strand, within AO353_16225 at 3602.624 kb on - strand, within AO353_16225 at 3602.624 kb on - strand, within AO353_16225 at 3602.624 kb on - strand, within AO353_16225 at 3602.624 kb on - strand, within AO353_16225 at 3602.624 kb on - strand, within AO353_16225 at 3602.624 kb on - strand, within AO353_16225 at 3603.226 kb on + strand, within AO353_16225 at 3603.226 kb on + strand, within AO353_16225 at 3603.226 kb on + strand, within AO353_16225 at 3603.226 kb on + strand, within AO353_16225 at 3603.227 kb on - strand, within AO353_16225 at 3603.227 kb on - strand, within AO353_16225 at 3603.227 kb on - strand, within AO353_16225 at 3603.227 kb on - strand, within AO353_16225 at 3603.266 kb on + strand, within AO353_16225 at 3603.266 kb on + strand, within AO353_16225 at 3603.267 kb on - strand, within AO353_16225 at 3603.277 kb on + strand, within AO353_16225 at 3603.277 kb on + strand, within AO353_16225 at 3603.277 kb on + strand, within AO353_16225 at 3603.278 kb on - strand, within AO353_16225 at 3603.278 kb on - strand, within AO353_16225 at 3603.515 kb on + strand at 3603.515 kb on + strand at 3603.516 kb on - strand at 3603.569 kb on + strand at 3603.569 kb on + strand at 3603.569 kb on + strand at 3603.570 kb on - strand at 3603.570 kb on - strand at 3603.570 kb on - strand at 3603.570 kb on - strand at 3603.699 kb on + strand, within AO353_16230 at 3603.700 kb on - strand, within AO353_16230 at 3603.764 kb on + strand, within AO353_16230 at 3603.764 kb on + strand, within AO353_16230 at 3603.764 kb on + strand, within AO353_16230 at 3603.764 kb on + strand, within AO353_16230 at 3603.764 kb on + strand, within AO353_16230 at 3603.764 kb on + strand, within AO353_16230 at 3603.764 kb on + strand, within AO353_16230 at 3603.764 kb on + strand, within AO353_16230 at 3603.764 kb on + strand, within AO353_16230 at 3603.765 kb on - strand, within AO353_16230 at 3603.765 kb on - strand, within AO353_16230 at 3603.765 kb on - strand, within AO353_16230 at 3603.765 kb on - strand, within AO353_16230 at 3603.765 kb on - strand, within AO353_16230 at 3603.765 kb on - strand, within AO353_16230 at 3603.765 kb on - strand, within AO353_16230 at 3603.782 kb on - strand, within AO353_16230 at 3603.820 kb on + strand, within AO353_16230 at 3603.821 kb on - strand, within AO353_16230 at 3603.821 kb on - strand, within AO353_16230 at 3603.875 kb on + strand, within AO353_16230 at 3603.875 kb on + strand, within AO353_16230 at 3603.875 kb on + strand, within AO353_16230 at 3603.875 kb on + strand, within AO353_16230 at 3603.875 kb on + strand, within AO353_16230 at 3603.875 kb on + strand, within AO353_16230 at 3603.875 kb on + strand, within AO353_16230 at 3603.876 kb on - strand, within AO353_16230 at 3603.876 kb on - strand, within AO353_16230 at 3603.876 kb on - strand, within AO353_16230 at 3603.876 kb on - strand, within AO353_16230 at 3603.876 kb on - strand, within AO353_16230 at 3603.876 kb on - strand, within AO353_16230 at 3603.876 kb on - strand, within AO353_16230 at 3603.876 kb on - strand, within AO353_16230 at 3603.876 kb on - strand, within AO353_16230 at 3604.070 kb on + strand, within AO353_16230 at 3604.070 kb on + strand, within AO353_16230 at 3604.070 kb on + strand, within AO353_16230 at 3604.070 kb on + strand, within AO353_16230 at 3604.070 kb on + strand, within AO353_16230 at 3604.071 kb on - strand, within AO353_16230 at 3604.071 kb on - strand, within AO353_16230 at 3604.071 kb on - strand, within AO353_16230 at 3604.071 kb on - strand, within AO353_16230 at 3604.120 kb on + strand, within AO353_16230 at 3604.120 kb on + strand, within AO353_16230 at 3604.120 kb on + strand, within AO353_16230 at 3604.120 kb on + strand, within AO353_16230
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 3,601,247 + AO353_16220 0.32 +0.5 3,601,277 + AO353_16220 0.35 +1.1 3,601,278 - AO353_16220 0.35 +0.7 3,601,613 + AO353_16220 0.68 -1.8 3,601,613 + AO353_16220 0.68 +0.7 3,601,613 + AO353_16220 0.68 -0.6 3,601,613 + AO353_16220 0.68 -0.2 3,601,614 - AO353_16220 0.68 -0.1 3,601,729 + AO353_16220 0.79 -0.7 3,601,871 + -0.0 3,601,943 + -0.3 3,601,943 + +0.7 3,601,943 + +1.5 3,601,944 - +0.1 3,601,944 - +0.3 3,601,944 - -0.6 3,602,027 - +0.3 3,602,036 + +0.9 3,602,036 + +1.3 3,602,037 - +0.0 3,602,037 - +0.5 3,602,258 - -0.5 3,602,258 - +0.1 3,602,258 - +0.5 3,602,258 - -0.3 3,602,313 + AO353_16225 0.13 +0.1 3,602,313 + AO353_16225 0.13 +0.1 3,602,365 + AO353_16225 0.17 -0.2 3,602,365 + AO353_16225 0.17 -0.2 3,602,365 + AO353_16225 0.17 -0.6 3,602,365 + AO353_16225 0.17 -0.3 3,602,365 + AO353_16225 0.17 +1.4 3,602,365 + AO353_16225 0.17 +0.4 3,602,366 - AO353_16225 0.17 -0.1 3,602,366 - AO353_16225 0.17 -0.4 3,602,366 - AO353_16225 0.17 -1.6 3,602,366 - AO353_16225 0.17 +0.7 3,602,366 - AO353_16225 0.17 +0.4 3,602,366 - AO353_16225 0.17 +0.7 3,602,373 + AO353_16225 0.18 -1.2 3,602,373 + AO353_16225 0.18 -2.1 3,602,373 + AO353_16225 0.18 +0.3 3,602,373 + AO353_16225 0.18 +0.2 3,602,374 - AO353_16225 0.18 +0.5 3,602,374 - AO353_16225 0.18 +0.2 3,602,374 - AO353_16225 0.18 -0.4 3,602,374 - AO353_16225 0.18 +1.0 3,602,374 - AO353_16225 0.18 +0.1 3,602,374 - AO353_16225 0.18 -0.8 3,602,374 - AO353_16225 0.18 -0.1 3,602,464 + AO353_16225 0.24 -0.3 3,602,464 + AO353_16225 0.24 +0.7 3,602,465 - AO353_16225 0.24 +1.2 3,602,465 - AO353_16225 0.24 +1.0 3,602,623 + AO353_16225 0.35 -0.4 3,602,623 + AO353_16225 0.35 +0.3 3,602,623 + AO353_16225 0.35 +0.2 3,602,623 + AO353_16225 0.35 -2.6 3,602,623 + AO353_16225 0.35 +1.1 3,602,623 + AO353_16225 0.35 +1.9 3,602,623 + AO353_16225 0.35 -0.8 3,602,624 - AO353_16225 0.36 +0.4 3,602,624 - AO353_16225 0.36 +0.7 3,602,624 - AO353_16225 0.36 -0.7 3,602,624 - AO353_16225 0.36 +0.7 3,602,624 - AO353_16225 0.36 -0.9 3,602,624 - AO353_16225 0.36 -1.6 3,602,624 - AO353_16225 0.36 +1.0 3,602,624 - AO353_16225 0.36 +0.6 3,602,624 - AO353_16225 0.36 +0.2 3,603,226 + AO353_16225 0.79 -0.8 3,603,226 + AO353_16225 0.79 +1.0 3,603,226 + AO353_16225 0.79 -0.2 3,603,226 + AO353_16225 0.79 +0.6 3,603,227 - AO353_16225 0.79 +0.0 3,603,227 - AO353_16225 0.79 -0.6 3,603,227 - AO353_16225 0.79 -0.3 3,603,227 - AO353_16225 0.79 +0.1 3,603,266 + AO353_16225 0.81 +0.7 3,603,266 + AO353_16225 0.81 -0.5 3,603,267 - AO353_16225 0.82 -0.2 3,603,277 + AO353_16225 0.82 -0.7 3,603,277 + AO353_16225 0.82 -0.4 3,603,277 + AO353_16225 0.82 +0.8 3,603,278 - AO353_16225 0.82 -0.4 3,603,278 - AO353_16225 0.82 +0.2 3,603,515 + +0.5 3,603,515 + +0.1 3,603,516 - +0.2 3,603,569 + +1.7 3,603,569 + -0.1 3,603,569 + +0.2 3,603,570 - +0.1 3,603,570 - +1.1 3,603,570 - -2.4 3,603,570 - -0.3 3,603,699 + AO353_16230 0.10 +0.3 3,603,700 - AO353_16230 0.10 +0.8 3,603,764 + AO353_16230 0.14 +1.4 3,603,764 + AO353_16230 0.14 +0.5 3,603,764 + AO353_16230 0.14 -0.7 3,603,764 + AO353_16230 0.14 -0.8 3,603,764 + AO353_16230 0.14 -0.5 3,603,764 + AO353_16230 0.14 -0.5 3,603,764 + AO353_16230 0.14 +0.0 3,603,764 + AO353_16230 0.14 +0.2 3,603,764 + AO353_16230 0.14 -2.4 3,603,765 - AO353_16230 0.14 +0.7 3,603,765 - AO353_16230 0.14 -0.4 3,603,765 - AO353_16230 0.14 -0.6 3,603,765 - AO353_16230 0.14 +0.8 3,603,765 - AO353_16230 0.14 +1.7 3,603,765 - AO353_16230 0.14 -0.3 3,603,765 - AO353_16230 0.14 +0.2 3,603,782 - AO353_16230 0.15 +1.9 3,603,820 + AO353_16230 0.17 -0.1 3,603,821 - AO353_16230 0.17 -0.6 3,603,821 - AO353_16230 0.17 +1.5 3,603,875 + AO353_16230 0.20 +0.7 3,603,875 + AO353_16230 0.20 -0.9 3,603,875 + AO353_16230 0.20 -0.9 3,603,875 + AO353_16230 0.20 +1.4 3,603,875 + AO353_16230 0.20 +0.5 3,603,875 + AO353_16230 0.20 -0.5 3,603,875 + AO353_16230 0.20 -0.1 3,603,876 - AO353_16230 0.20 +1.3 3,603,876 - AO353_16230 0.20 -0.1 3,603,876 - AO353_16230 0.20 +1.4 3,603,876 - AO353_16230 0.20 +0.1 3,603,876 - AO353_16230 0.20 +0.1 3,603,876 - AO353_16230 0.20 +0.9 3,603,876 - AO353_16230 0.20 -1.1 3,603,876 - AO353_16230 0.20 +1.3 3,603,876 - AO353_16230 0.20 -0.9 3,604,070 + AO353_16230 0.31 +0.6 3,604,070 + AO353_16230 0.31 -1.6 3,604,070 + AO353_16230 0.31 +1.0 3,604,070 + AO353_16230 0.31 +0.3 3,604,070 + AO353_16230 0.31 -0.3 3,604,071 - AO353_16230 0.31 -0.3 3,604,071 - AO353_16230 0.31 -0.1 3,604,071 - AO353_16230 0.31 +1.1 3,604,071 - AO353_16230 0.31 -0.3 3,604,120 + AO353_16230 0.34 -0.3 3,604,120 + AO353_16230 0.34 -0.3 3,604,120 + AO353_16230 0.34 -0.3 3,604,120 + AO353_16230 0.34 +0.9
Or see this region's nucleotide sequence