Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_967

Experiment: Bile salts 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bile salts 0.0125 M
1,135,862	-		Pf6N2E2_965	0.85	+0.6
1,136,050	+				-1.7
1,136,051	-				-1.0
1,136,135	-		Pf6N2E2_966	0.12	-2.2
1,136,135	-		Pf6N2E2_966	0.12	-0.2
1,136,135	-		Pf6N2E2_966	0.12	-0.6
1,136,135	-		Pf6N2E2_966	0.12	+1.1
1,136,135	-		Pf6N2E2_966	0.12	-0.9
1,136,139	+		Pf6N2E2_966	0.12	+0.9
1,136,140	-		Pf6N2E2_966	0.12	-0.3
1,136,140	-		Pf6N2E2_966	0.12	+1.6
1,136,140	-		Pf6N2E2_966	0.12	+0.0
1,136,255	+		Pf6N2E2_966	0.28	-1.0
1,136,256	-		Pf6N2E2_966	0.28	-1.5
1,136,256	-		Pf6N2E2_966	0.28	+0.5
1,136,401	+		Pf6N2E2_966	0.47	-1.0
1,136,402	-		Pf6N2E2_966	0.47	-1.4
1,136,458	+		Pf6N2E2_966	0.55	-1.7
1,136,459	-		Pf6N2E2_966	0.55	+0.4
1,136,459	-		Pf6N2E2_966	0.55	+1.6
1,136,509	+		Pf6N2E2_966	0.62	-1.7
1,136,509	+		Pf6N2E2_966	0.62	-0.7
1,136,510	-		Pf6N2E2_966	0.62	+0.3
1,136,510	-		Pf6N2E2_966	0.62	+1.1
1,136,625	+		Pf6N2E2_966	0.77	+2.6
1,136,626	-		Pf6N2E2_966	0.77	-1.0
1,136,661	+		Pf6N2E2_966	0.82	+0.1
1,136,706	+		Pf6N2E2_966	0.88	-2.8
1,137,185	+		Pf6N2E2_967	0.68	+2.1
1,137,189	+		Pf6N2E2_967	0.69	+0.3
1,137,189	+		Pf6N2E2_967	0.69	+3.4
1,137,215	+				+1.2
1,137,215	+		Pf6N2E2_967	0.74	-1.9
1,137,216	-		Pf6N2E2_967	0.74	+2.8
1,137,216	-		Pf6N2E2_967	0.74	+0.0
1,137,216	-		Pf6N2E2_967	0.74	+0.6
1,137,216	-		Pf6N2E2_967	0.74	+0.5
1,137,253	+		Pf6N2E2_967	0.82	+0.0
1,137,253	+		Pf6N2E2_967	0.82	+1.6
1,137,254	-		Pf6N2E2_967	0.82	-1.9
1,137,328	+				+1.6
1,137,329	-				+1.6
1,137,348	+				+2.0
1,137,348	+				+0.7
1,137,364	-				-2.7
1,137,522	+		Pf6N2E2_968	0.30	-3.0
1,137,625	+		Pf6N2E2_968	0.70	+1.5
1,137,625	+		Pf6N2E2_968	0.70	-2.4
1,137,626	-		Pf6N2E2_968	0.71	-2.7
1,137,628	+		Pf6N2E2_968	0.71	+0.8
1,137,754	+				-2.0
1,137,754	+				-2.0
1,137,755	-				-0.9
1,137,788	+				+0.6
1,137,788	+				+1.6
1,137,789	-				-2.1
1,137,789	-				-1.0
1,137,997	+		Pf6N2E2_969	0.39	-1.6
1,137,997	+		Pf6N2E2_969	0.39	-0.6
1,138,055	-		Pf6N2E2_969	0.49	+2.0
1,138,101	+		Pf6N2E2_969	0.57	-1.8
1,138,130	+		Pf6N2E2_969	0.62	-1.5
1,138,130	+		Pf6N2E2_969	0.62	+0.1
1,138,130	+		Pf6N2E2_969	0.62	+1.3
1,138,131	-		Pf6N2E2_969	0.62	-0.6
1,138,132	+		Pf6N2E2_969	0.62	-1.7
1,138,133	-		Pf6N2E2_969	0.62	-1.1
1,138,263	+		Pf6N2E2_969	0.85	-0.4
1,138,305	+				-1.1
1,138,305	+				+0.5
1,138,305	+				+0.5
1,138,315	+				-1.7
1,138,316	-				+0.2
1,138,316	-				-2.0