Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_8

Experiment: Bile salts 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bile salts 0.0125 M
31,190	+				+0.3
31,190	+				-2.8
31,190	+				-0.3
31,190	+				+0.7
31,191	-				+2.4
31,277	+				-1.1
31,277	+				+0.2
31,312	+				+0.5
31,312	+				-2.2
31,312	+				+0.7
31,312	+				-1.1
31,312	+				+2.0
31,312	+				+0.7
31,313	-				+0.7
31,313	-				+1.2
31,313	-				-0.8
31,363	+				+0.6
31,364	-				+0.6
31,409	-				-1.4
31,636	+				-0.4
31,640	+				+0.5
31,640	+				-2.3
31,641	-				-0.6
31,641	-				-0.1
31,641	-				+0.5
31,644	+				-2.4
31,644	+				+0.2
31,644	+				-2.3
31,645	-				+1.9
31,645	-				+1.2
31,645	-				+1.7
31,645	-				-0.5
31,645	-				+1.7
31,645	-				-2.2
31,842	+				+1.3
31,843	-				-2.3
31,843	-				+1.0
31,848	+				-2.8
31,849	-				-0.7
31,851	+				-2.3
31,852	-				+0.6
31,852	-				-1.1
32,075	+				-1.4
32,075	+				+0.7
32,075	+				+0.4
32,076	-				+0.7
32,076	-				-1.1
32,194	+		Pf6N2E2_8	0.13	-0.1
32,298	-		Pf6N2E2_8	0.18	+1.6
32,540	+		Pf6N2E2_8	0.27	-0.7
32,541	-		Pf6N2E2_8	0.27	+0.4
32,849	+		Pf6N2E2_8	0.40	+0.0
33,035	+		Pf6N2E2_8	0.47	+0.0
33,036	-		Pf6N2E2_8	0.47	-2.2
33,036	-		Pf6N2E2_8	0.47	-2.2
33,039	-		Pf6N2E2_8	0.48	+0.0
33,039	-		Pf6N2E2_8	0.48	-0.6
33,039	-		Pf6N2E2_8	0.48	+2.5
33,179	+		Pf6N2E2_8	0.53	-0.7
33,179	+		Pf6N2E2_8	0.53	+2.7
33,180	-		Pf6N2E2_8	0.53	+0.4
33,313	+		Pf6N2E2_8	0.59	+0.0
33,390	-		Pf6N2E2_8	0.62	+0.6
33,390	-		Pf6N2E2_8	0.62	+0.9
33,437	+		Pf6N2E2_8	0.64	+0.4
33,461	+		Pf6N2E2_8	0.65	-1.8
33,462	-		Pf6N2E2_8	0.65	+0.8
33,527	+		Pf6N2E2_8	0.67	-1.3
33,528	-		Pf6N2E2_8	0.67	+0.3
33,572	-		Pf6N2E2_8	0.69	+1.3
33,638	+		Pf6N2E2_8	0.72	+3.2
33,638	+		Pf6N2E2_8	0.72	+0.3
33,638	+		Pf6N2E2_8	0.72	-0.3
33,638	+		Pf6N2E2_8	0.72	+2.7
33,638	+		Pf6N2E2_8	0.72	+0.2
33,638	+		Pf6N2E2_8	0.72	-0.3
33,639	-		Pf6N2E2_8	0.72	-0.1
33,639	-		Pf6N2E2_8	0.72	-0.3
33,639	-		Pf6N2E2_8	0.72	-2.8
33,639	-		Pf6N2E2_8	0.72	+1.3
33,639	-		Pf6N2E2_8	0.72	-1.1
33,639	-		Pf6N2E2_8	0.72	+1.9
33,639	-		Pf6N2E2_8	0.72	-1.7
33,674	+		Pf6N2E2_8	0.73	-1.4
33,674	+		Pf6N2E2_8	0.73	-1.8
33,675	-		Pf6N2E2_8	0.73	+1.9
33,675	-		Pf6N2E2_8	0.73	+1.6
33,749	+		Pf6N2E2_8	0.76	-1.6
33,749	+		Pf6N2E2_8	0.76	-0.2
33,749	+		Pf6N2E2_8	0.76	-1.6
33,750	-		Pf6N2E2_8	0.76	-2.0
33,750	-		Pf6N2E2_8	0.76	+0.7
33,750	-		Pf6N2E2_8	0.76	+1.0
33,750	-		Pf6N2E2_8	0.76	+0.2
33,793	+		Pf6N2E2_8	0.78	+2.6
33,794	-		Pf6N2E2_8	0.78	+0.3
33,794	-		Pf6N2E2_8	0.78	-1.9
33,794	-		Pf6N2E2_8	0.78	+0.6
33,794	-		Pf6N2E2_8	0.78	+1.7
33,853	+		Pf6N2E2_8	0.80	-3.6
33,962	+		Pf6N2E2_8	0.85	+0.3
33,962	+		Pf6N2E2_8	0.85	+0.3
33,962	+		Pf6N2E2_8	0.85	-1.6
33,962	+		Pf6N2E2_8	0.85	-1.8
33,962	+		Pf6N2E2_8	0.85	+1.3
33,962	+		Pf6N2E2_8	0.85	-1.1
33,962	+		Pf6N2E2_8	0.85	+0.9
33,963	-		Pf6N2E2_8	0.85	+2.2
33,963	-		Pf6N2E2_8	0.85	+1.8
33,963	-		Pf6N2E2_8	0.85	+1.0
34,016	-		Pf6N2E2_8	0.87	+1.5
34,052	-		Pf6N2E2_8	0.88	-2.3
34,052	-		Pf6N2E2_8	0.88	-2.9
34,055	+		Pf6N2E2_8	0.89	+2.3
34,055	+		Pf6N2E2_8	0.89	+1.6
34,128	-				-0.8
34,133	+				-2.3
34,133	+				+0.7
34,134	-				+0.9
34,134	-				+0.6
34,154	+				+0.9
34,241	+				-0.2
34,241	+				+0.7
34,241	+				-1.3
34,241	+				+1.2
34,242	-				-1.8
34,257	-				-0.2
34,319	+				-1.3
34,320	-				+0.7
34,386	-				-1.8
34,543	-				+0.7
34,543	-				+1.4
34,546	+				-2.2
34,546	+				-2.2
34,546	+				+0.6
34,547	-				+2.0
34,547	-				+0.3
34,547	-				+1.0
34,547	-				+2.5
34,547	-				-2.0
34,547	-				-2.4
34,547	-				+0.7
34,667	-				-1.6
34,667	-				-0.7
34,667	-				-0.1
34,669	-				-2.7
34,738	+				-1.1
34,939	-				-0.2
34,983	+		Pf6N2E2_9	0.11	-0.1
34,983	+		Pf6N2E2_9	0.11	+0.5
34,983	+		Pf6N2E2_9	0.11	-1.8
34,984	-		Pf6N2E2_9	0.11	-0.1
34,984	-		Pf6N2E2_9	0.11	-2.1
35,119	+		Pf6N2E2_9	0.14	-1.2
35,190	+		Pf6N2E2_9	0.16	-0.9
35,191	-		Pf6N2E2_9	0.16	-1.7
35,191	-		Pf6N2E2_9	0.16	-0.0
35,191	-		Pf6N2E2_9	0.16	+0.4
35,193	+		Pf6N2E2_9	0.16	+0.4