Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_6066

Experiment: Bile salts 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bile salts 0.0125 M
6,887,199	+				-0.6
6,887,947	+		Pf6N2E2_6065	0.77	+2.2
6,888,038	-		Pf6N2E2_6065	0.87	-0.8
6,888,151	+				-2.9
6,888,152	-				+0.7
6,888,152	-				-1.8
6,888,458	-		Pf6N2E2_6066	0.34	+2.1
6,888,458	-		Pf6N2E2_6066	0.34	-1.7
6,888,532	+		Pf6N2E2_6066	0.42	-0.4
6,888,533	-		Pf6N2E2_6066	0.43	-2.0
6,888,533	-		Pf6N2E2_6066	0.43	+0.5
6,888,533	-		Pf6N2E2_6066	0.43	-1.5
6,888,708	+		Pf6N2E2_6066	0.62	-2.0
6,888,709	-		Pf6N2E2_6066	0.62	-1.0
6,888,709	-		Pf6N2E2_6066	0.62	-0.9
6,888,709	-		Pf6N2E2_6066	0.62	-0.1
6,888,755	-		Pf6N2E2_6066	0.67	-1.2
6,888,815	-		Pf6N2E2_6066	0.74	-0.3
6,888,904	-		Pf6N2E2_6066	0.84	+1.3
6,888,904	-		Pf6N2E2_6066	0.84	-0.8
6,889,042	+				+4.0
6,889,042	+				-0.5
6,889,042	+				+2.1
6,889,042	+				-1.7
6,889,043	-				-2.4
6,889,043	-				-1.7
6,889,043	-				-0.6
6,889,043	-				+0.7
6,889,043	-				+0.8
6,889,260	-		Pf6N2E2_6067	0.28	-2.7
6,889,260	-		Pf6N2E2_6067	0.28	+2.0
6,889,260	-		Pf6N2E2_6067	0.28	+1.9
6,889,443	+		Pf6N2E2_6067	0.52	-1.7
6,889,443	+		Pf6N2E2_6067	0.52	+1.0
6,889,444	-		Pf6N2E2_6067	0.52	-2.4
6,889,444	-		Pf6N2E2_6067	0.52	-0.6
6,889,551	+		Pf6N2E2_6067	0.67	+0.6
6,889,877	+				-0.6
6,889,878	-				-2.5
6,889,893	+		Pf6N2E2_6068	0.10	+0.2
6,889,893	+		Pf6N2E2_6068	0.10	-3.3
6,889,893	+		Pf6N2E2_6068	0.10	+0.9
6,889,893	+		Pf6N2E2_6068	0.10	-1.4
6,889,894	-		Pf6N2E2_6068	0.10	+0.4
6,889,894	-		Pf6N2E2_6068	0.10	+3.5
6,889,946	+		Pf6N2E2_6068	0.16	-2.6
6,889,946	+		Pf6N2E2_6068	0.16	+1.0
6,889,946	+		Pf6N2E2_6068	0.16	+0.0
6,889,946	+		Pf6N2E2_6068	0.16	+2.3
6,889,946	+		Pf6N2E2_6068	0.16	-0.8
6,889,947	-		Pf6N2E2_6068	0.16	+1.4
6,889,947	-		Pf6N2E2_6068	0.16	-2.1
6,889,947	-		Pf6N2E2_6068	0.16	-2.1
6,889,947	-		Pf6N2E2_6068	0.16	+1.7