Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5975

Experiment: Bile salts 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bile salts 0.0125 M
6,791,738	+		Pf6N2E2_5973	0.81	+0.6
6,791,739	-		Pf6N2E2_5973	0.82	-1.8
6,791,855	+				-1.8
6,791,856	-				-2.8
6,791,895	-				+1.0
6,791,895	-				-1.2
6,792,002	+		Pf6N2E2_5974	0.27	+0.6
6,792,003	-		Pf6N2E2_5974	0.27	+0.4
6,792,003	-		Pf6N2E2_5974	0.27	-1.5
6,792,109	+		Pf6N2E2_5974	0.44	-0.4
6,792,110	-		Pf6N2E2_5974	0.44	-3.0
6,792,243	-		Pf6N2E2_5974	0.65	+0.7
6,792,377	+		Pf6N2E2_5974	0.86	-0.6
6,792,477	+				+0.1
6,792,477	+				+0.9
6,792,504	+				-1.5
6,792,505	-				-2.4
6,792,505	-				-1.6
6,792,505	-				-2.2
6,792,505	-				+0.7
6,792,505	-				+2.1
6,792,505	-				-1.5
6,792,561	-				+0.5
6,792,578	-				-0.4
6,792,607	+				-2.3
6,792,608	-				-2.9
6,792,608	-				-1.5
6,792,608	-				+2.4
6,792,608	-				-0.6
6,792,609	+				+0.4
6,792,609	+				+1.0
6,792,610	-				-2.7
6,792,610	-				-1.4
6,792,705	-				+0.4
6,792,927	-		Pf6N2E2_5975	0.28	-1.0
6,792,969	+		Pf6N2E2_5975	0.32	+0.1
6,792,969	+		Pf6N2E2_5975	0.32	-1.0
6,792,970	-		Pf6N2E2_5975	0.32	-0.6
6,793,249	+		Pf6N2E2_5975	0.61	-1.6
6,793,249	+		Pf6N2E2_5975	0.61	+1.6
6,793,250	-		Pf6N2E2_5975	0.61	-2.5
6,793,250	-		Pf6N2E2_5975	0.61	-2.2
6,793,391	+		Pf6N2E2_5975	0.75	-1.0
6,793,744	-		Pf6N2E2_5976	0.15	+0.6
6,793,965	+		Pf6N2E2_5976	0.50	+5.5
6,793,965	+		Pf6N2E2_5976	0.50	-1.4
6,793,966	-		Pf6N2E2_5976	0.50	-1.6
6,794,029	+		Pf6N2E2_5976	0.61	+3.8
6,794,029	+		Pf6N2E2_5976	0.61	+3.1
6,794,029	+		Pf6N2E2_5976	0.61	+2.9
6,794,030	-		Pf6N2E2_5976	0.61	+0.9
6,794,030	-		Pf6N2E2_5976	0.61	+1.3
6,794,030	-		Pf6N2E2_5976	0.61	+0.6
6,794,030	-		Pf6N2E2_5976	0.61	+2.0
6,794,030	-		Pf6N2E2_5976	0.61	+0.3
6,794,130	-		Pf6N2E2_5976	0.77	-2.4
6,794,244	+				+2.2
6,794,244	+				+1.0
6,794,349	+				-2.0
6,794,473	+		Pf6N2E2_5977	0.13	+0.7