Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5968

Experiment: Bile salts 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bile salts 0.0125 M
6,786,250	+		Pf6N2E2_5967	0.74	+2.6
6,786,251	-		Pf6N2E2_5967	0.74	-2.5
6,786,253	-		Pf6N2E2_5967	0.74	+0.1
6,786,253	-		Pf6N2E2_5967	0.74	+2.7
6,786,278	-		Pf6N2E2_5967	0.77	-1.7
6,786,408	+				-0.8
6,786,409	-				-2.6
6,786,409	-				-0.6
6,786,454	+				+0.7
6,786,454	+				-3.0
6,786,454	+				+0.3
6,786,455	-				+0.4
6,786,455	-				-0.3
6,786,468	-				+1.8
6,786,543	+				-2.2
6,786,543	+				+0.6
6,786,544	-				+2.6
6,786,640	+				+0.5
6,786,640	+				-0.0
6,786,640	+				+1.7
6,786,641	-				+2.2
6,786,818	-		Pf6N2E2_5968	0.18	+1.0
6,787,035	+		Pf6N2E2_5968	0.39	-1.9
6,787,035	+		Pf6N2E2_5968	0.39	-0.0
6,787,036	-		Pf6N2E2_5968	0.39	-1.9
6,787,036	-		Pf6N2E2_5968	0.39	+1.2
6,787,036	-		Pf6N2E2_5968	0.39	-2.6
6,787,041	-		Pf6N2E2_5968	0.40	+2.5
6,787,041	-		Pf6N2E2_5968	0.40	+0.8
6,787,041	-		Pf6N2E2_5968	0.40	-2.9
6,787,041	-		Pf6N2E2_5968	0.40	-1.0
6,787,133	+		Pf6N2E2_5968	0.49	-0.0
6,787,133	+		Pf6N2E2_5968	0.49	+0.2
6,787,133	+		Pf6N2E2_5968	0.49	+1.2
6,787,133	+		Pf6N2E2_5968	0.49	-0.4
6,787,134	-		Pf6N2E2_5968	0.49	-1.4
6,787,134	-		Pf6N2E2_5968	0.49	-2.6
6,787,151	+		Pf6N2E2_5968	0.51	+0.4
6,787,151	+		Pf6N2E2_5968	0.51	+0.8
6,787,151	+		Pf6N2E2_5968	0.51	-1.4
6,787,151	+		Pf6N2E2_5968	0.51	-0.2
6,787,151	+		Pf6N2E2_5968	0.51	+0.5
6,787,151	+		Pf6N2E2_5968	0.51	-2.4
6,787,152	-		Pf6N2E2_5968	0.51	-2.3
6,787,152	-		Pf6N2E2_5968	0.51	-2.5
6,787,152	-		Pf6N2E2_5968	0.51	-2.6
6,787,152	-		Pf6N2E2_5968	0.51	-0.4
6,787,152	-		Pf6N2E2_5968	0.51	-1.6
6,787,152	-		Pf6N2E2_5968	0.51	-0.6
6,787,152	-		Pf6N2E2_5968	0.51	+1.0
6,787,154	-		Pf6N2E2_5968	0.51	+0.4
6,787,238	+		Pf6N2E2_5968	0.59	-2.7
6,787,238	+		Pf6N2E2_5968	0.59	-0.8
6,787,239	-		Pf6N2E2_5968	0.60	-2.3
6,787,239	-		Pf6N2E2_5968	0.60	-1.4
6,787,508	+		Pf6N2E2_5968	0.86	+0.6
6,787,509	-		Pf6N2E2_5968	0.86	-2.5
6,787,509	-		Pf6N2E2_5968	0.86	-2.0
6,787,529	+		Pf6N2E2_5968	0.88	-2.4
6,787,529	+		Pf6N2E2_5968	0.88	-0.6
6,787,529	+		Pf6N2E2_5968	0.88	+1.0
6,787,529	+		Pf6N2E2_5968	0.88	-1.5
6,787,529	+		Pf6N2E2_5968	0.88	+2.4
6,787,530	-		Pf6N2E2_5968	0.88	-0.4
6,787,530	-		Pf6N2E2_5968	0.88	-1.1
6,787,530	-		Pf6N2E2_5968	0.88	+0.8
6,787,530	-		Pf6N2E2_5968	0.88	+1.4
6,787,530	-		Pf6N2E2_5968	0.88	-1.6
6,787,565	+				+0.8
6,787,565	+				+1.8
6,787,566	-				-2.6
6,787,566	-				-1.8
6,787,566	-				+1.7
6,787,705	+				+2.1
6,787,705	+				-0.5
6,787,706	-				+0.2
6,787,706	-				+0.8
6,787,706	-				-1.3
6,787,720	+				+1.0
6,787,720	+				+1.4
6,787,913	+		Pf6N2E2_5969	0.12	+0.1
6,787,913	+		Pf6N2E2_5969	0.12	+0.6
6,787,913	+		Pf6N2E2_5969	0.12	+1.4
6,787,913	+		Pf6N2E2_5969	0.12	+0.2
6,787,913	+		Pf6N2E2_5969	0.12	+0.6
6,787,913	+		Pf6N2E2_5969	0.12	-1.6
6,787,913	+		Pf6N2E2_5969	0.12	+2.8
6,787,914	-		Pf6N2E2_5969	0.12	+1.0
6,787,914	-		Pf6N2E2_5969	0.12	+0.4
6,787,914	-		Pf6N2E2_5969	0.12	+0.1
6,787,914	-		Pf6N2E2_5969	0.12	-0.2
6,787,914	-		Pf6N2E2_5969	0.12	-1.7
6,788,197	-		Pf6N2E2_5969	0.31	-1.3
6,788,336	+		Pf6N2E2_5969	0.40	-0.4
6,788,337	-		Pf6N2E2_5969	0.40	+0.6
6,788,405	+		Pf6N2E2_5969	0.44	-1.5
6,788,405	+		Pf6N2E2_5969	0.44	+0.3
6,788,406	-		Pf6N2E2_5969	0.44	-0.0
6,788,489	+		Pf6N2E2_5969	0.50	-2.7
6,788,489	+		Pf6N2E2_5969	0.50	-0.2
6,788,489	+		Pf6N2E2_5969	0.50	+0.3
6,788,489	+		Pf6N2E2_5969	0.50	+0.5
6,788,489	+		Pf6N2E2_5969	0.50	+3.2
6,788,489	+		Pf6N2E2_5969	0.50	-0.4
6,788,489	+		Pf6N2E2_5969	0.50	+1.0
6,788,489	+		Pf6N2E2_5969	0.50	+0.6
6,788,489	+		Pf6N2E2_5969	0.50	+0.3
6,788,489	+		Pf6N2E2_5969	0.50	+1.2
6,788,489	+		Pf6N2E2_5969	0.50	+0.4
6,788,489	+		Pf6N2E2_5969	0.50	-1.9
6,788,489	+		Pf6N2E2_5969	0.50	+0.1
6,788,489	+		Pf6N2E2_5969	0.50	+2.1
6,788,489	+		Pf6N2E2_5969	0.50	-0.7
6,788,489	+		Pf6N2E2_5969	0.50	+1.7
6,788,489	+		Pf6N2E2_5969	0.50	-0.5
6,788,489	+		Pf6N2E2_5969	0.50	+0.5
6,788,489	+		Pf6N2E2_5969	0.50	+0.5
6,788,489	+		Pf6N2E2_5969	0.50	-2.2
6,788,489	+		Pf6N2E2_5969	0.50	+1.2
6,788,489	+		Pf6N2E2_5969	0.50	-3.2
6,788,489	+		Pf6N2E2_5969	0.50	-1.1
6,788,489	+		Pf6N2E2_5969	0.50	+1.5
6,788,489	+		Pf6N2E2_5969	0.50	-0.9
6,788,489	+		Pf6N2E2_5969	0.50	-1.2
6,788,490	-		Pf6N2E2_5969	0.50	-0.8
6,788,490	-		Pf6N2E2_5969	0.50	+0.5
6,788,490	-		Pf6N2E2_5969	0.50	+1.3
6,788,490	-		Pf6N2E2_5969	0.50	+1.2
6,788,490	-		Pf6N2E2_5969	0.50	+0.2
6,788,490	-		Pf6N2E2_5969	0.50	+0.6
6,788,490	-		Pf6N2E2_5969	0.50	-0.7
6,788,490	-		Pf6N2E2_5969	0.50	+0.5
6,788,490	-		Pf6N2E2_5969	0.50	-0.4
6,788,490	-		Pf6N2E2_5969	0.50	+1.1
6,788,490	-		Pf6N2E2_5969	0.50	+1.6
6,788,490	-		Pf6N2E2_5969	0.50	-0.6
6,788,490	-		Pf6N2E2_5969	0.50	+0.6
6,788,490	-		Pf6N2E2_5969	0.50	+0.2
6,788,490	-		Pf6N2E2_5969	0.50	+0.7
6,788,490	-		Pf6N2E2_5969	0.50	+0.2
6,788,490	-		Pf6N2E2_5969	0.50	+0.5
6,788,490	-		Pf6N2E2_5969	0.50	-2.9
6,788,490	-		Pf6N2E2_5969	0.50	+0.3
6,788,496	-		Pf6N2E2_5969	0.50	+1.2