Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_548

Experiment: Bile salts 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bile salts 0.0125 M
615,859	-		Pf6N2E2_546	0.80	+1.7
615,876	+		Pf6N2E2_546	0.85	+0.4
615,877	-		Pf6N2E2_546	0.85	-1.5
615,938	+				-0.9
615,963	+				-0.9
615,963	+				-1.1
615,963	+				-0.8
615,963	+				+0.9
615,964	-				+0.7
615,964	-				-0.1
615,964	-				+0.5
615,964	-				+0.6
615,967	+				+1.4
615,967	+				+0.4
615,967	+				+0.7
615,967	+				-1.0
615,967	+				+0.7
615,967	+				-1.7
615,967	+				-0.3
615,968	-				-1.8
615,968	-				+0.7
615,968	-				-1.5
615,968	-				+1.6
615,968	-				-1.6
615,968	-				-2.2
615,968	-				-2.9
615,968	-				-1.1
615,968	-				+1.2
615,968	-				-1.1
615,968	-				-2.3
615,968	-				-1.1
615,968	-				+2.8
615,972	+				-0.2
615,973	-				-1.6
615,973	-				+1.9
615,976	+				+0.5
615,976	+				+0.5
615,976	+				+0.4
615,976	+				+0.6
615,976	+				+0.3
615,976	+				+0.5
615,976	+				+1.9
615,976	+				-1.1
615,976	+				+0.2
615,976	+				-1.8
615,977	-				-1.9
615,977	-				-0.2
615,977	-				-1.8
615,977	-				-1.4
615,977	-				-2.3
615,984	+				-0.8
615,984	+				+0.4
615,984	+				+1.0
615,984	+				+0.5
615,985	-				+2.3
615,985	-				+0.3
615,985	-				+2.4
616,092	+				-3.6
616,160	-				+1.2
616,160	-				+0.4
616,160	-				+1.6
616,160	-				+0.7
616,396	+		Pf6N2E2_547	0.44	-1.9
616,397	-		Pf6N2E2_547	0.44	-0.6
616,397	-		Pf6N2E2_547	0.44	-2.1
616,433	-		Pf6N2E2_547	0.51	+0.0
616,469	-		Pf6N2E2_547	0.57	-0.3
616,469	-		Pf6N2E2_547	0.57	-0.9
616,576	+		Pf6N2E2_547	0.77	+1.9
617,012	+		Pf6N2E2_548	0.15	+1.7
617,036	+		Pf6N2E2_548	0.16	+0.0
617,418	-		Pf6N2E2_548	0.35	-2.3
617,612	+		Pf6N2E2_548	0.45	+0.7
617,613	-		Pf6N2E2_548	0.45	+0.2
617,669	+		Pf6N2E2_548	0.48	-0.7
617,669	+		Pf6N2E2_548	0.48	+2.7
617,670	-		Pf6N2E2_548	0.48	+1.1
617,670	-		Pf6N2E2_548	0.48	+0.6
617,670	-		Pf6N2E2_548	0.48	+0.7
617,705	+		Pf6N2E2_548	0.49	+1.2
617,963	+		Pf6N2E2_548	0.62	-2.2
617,963	+		Pf6N2E2_548	0.62	+2.6
617,963	+		Pf6N2E2_548	0.62	+1.5
617,964	-		Pf6N2E2_548	0.62	+1.1
618,032	+		Pf6N2E2_548	0.66	+2.5
618,128	+		Pf6N2E2_548	0.70	+0.9
618,128	+		Pf6N2E2_548	0.70	-1.5
618,279	-		Pf6N2E2_548	0.78	-1.5
618,279	-		Pf6N2E2_548	0.78	-1.8
618,290	+		Pf6N2E2_548	0.78	-1.1
618,306	-		Pf6N2E2_548	0.79	+0.1
618,306	-		Pf6N2E2_548	0.79	+0.9
618,452	+		Pf6N2E2_548	0.86	-1.5
618,659	+				-1.8
618,659	+				-2.8
618,660	-				+0.7
618,743	-				-0.3
618,764	+				-0.2
618,764	+				+1.8
618,784	+				+0.4
618,787	+				-1.6
618,787	+				-2.4
618,787	+				+0.5
618,788	-				-0.5
618,818	-				+0.1
618,874	+				+1.7
618,875	-				-2.0
618,875	-				+2.7
618,907	+				-1.5
618,907	+				+1.8
618,907	+				+1.0
618,907	+				+0.9
618,908	-				+1.3
618,908	-				-0.3
618,908	-				+2.4
618,908	-				-0.6
618,908	-				+0.5
618,908	-				-1.3
618,911	+				-0.9
618,997	+				-1.5
618,998	-				-1.5
618,998	-				+1.7
618,999	+				+0.8
618,999	+				-0.0
618,999	+				+1.0
618,999	+				+0.7
618,999	+				+1.1
619,000	-				-2.8
619,000	-				-0.0
619,006	+				+1.9
619,006	+				-0.2
619,007	-				-2.5
619,068	-				-0.6
619,123	+				+1.7
619,124	-				-0.4
619,124	-				+1.1
619,124	-				+0.9
619,154	-				-1.3
619,154	-				-2.5
619,154	-				-2.2
619,154	-				-1.2
619,156	+				-2.6
619,157	-				-3.2
619,157	-				+1.0