Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5275

Experiment: Bile salts 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bile salts 0.0125 M
6,066,786	-				-1.7
6,066,832	+				-2.2
6,066,832	+				+0.7
6,066,832	+				+1.0
6,066,833	-				-1.7
6,066,833	-				-2.0
6,066,833	-				+1.1
6,066,833	-				-1.0
6,066,880	+				+1.2
6,066,880	+				+0.7
6,066,880	+				+1.1
6,066,880	+				-2.0
6,066,880	+				+2.1
6,066,880	+				-1.4
6,066,880	+				-2.0
6,066,881	-				+1.3
6,066,881	-				-2.7
6,066,881	-				+0.7
6,066,881	-				+0.9
6,066,899	-				-1.8
6,066,899	-				+1.9
6,066,913	+		Pf6N2E2_5274	0.12	-3.6
6,066,913	+		Pf6N2E2_5274	0.12	-3.0
6,066,913	+		Pf6N2E2_5274	0.12	-2.9
6,066,913	+		Pf6N2E2_5274	0.12	-2.1
6,066,914	-		Pf6N2E2_5274	0.12	-2.1
6,067,002	+		Pf6N2E2_5274	0.24	+2.1
6,067,002	+		Pf6N2E2_5274	0.24	+0.1
6,067,003	-		Pf6N2E2_5274	0.24	-3.3
6,067,003	-		Pf6N2E2_5274	0.24	+1.8
6,067,003	-		Pf6N2E2_5274	0.24	-0.1
6,067,100	-		Pf6N2E2_5274	0.38	+1.3
6,067,180	-		Pf6N2E2_5274	0.49	+1.5
6,067,180	-		Pf6N2E2_5274	0.49	-2.8
6,067,180	-		Pf6N2E2_5274	0.49	+1.1
6,067,208	-		Pf6N2E2_5274	0.53	-1.9
6,067,208	-		Pf6N2E2_5274	0.53	+1.1
6,067,296	+		Pf6N2E2_5274	0.65	-1.0
6,067,296	+		Pf6N2E2_5274	0.65	+0.4
6,067,297	-		Pf6N2E2_5274	0.66	+0.5
6,067,297	-		Pf6N2E2_5274	0.66	-3.2
6,067,297	-		Pf6N2E2_5274	0.66	+1.5
6,067,297	-		Pf6N2E2_5274	0.66	-1.8
6,067,297	-		Pf6N2E2_5274	0.66	+0.8
6,067,436	-		Pf6N2E2_5274	0.85	+0.8
6,067,541	+				-2.3
6,067,541	+				+0.2
6,067,542	-				+0.2
6,067,542	-				-3.0
6,067,542	-				+1.3
6,067,542	-				-1.3
6,067,542	-				-0.4
6,067,542	-				-1.1
6,067,542	-				+0.1
6,067,563	-				+1.1
6,067,573	+				+1.2
6,067,573	+				-0.9
6,067,573	+				-0.2
6,067,573	+				+1.8
6,067,574	-				+1.6
6,067,574	-				+1.4
6,067,574	-				-3.4
6,067,574	-				+0.6
6,067,576	-				+0.1
6,067,598	+				-2.7
6,067,598	+				-1.7
6,067,598	+				+0.2
6,067,598	+				+1.2
6,067,598	+				-2.4
6,067,598	+				-3.1
6,067,598	+				-0.5
6,067,598	+				+0.2
6,067,598	+				-2.5
6,067,599	-				+0.5
6,067,599	-				-0.5
6,067,599	-				-0.7
6,067,599	-				+1.1
6,067,599	-				+0.2
6,067,599	-				-1.0
6,067,599	-				-1.5
6,067,599	-				-1.1
6,067,599	-				-2.6
6,067,599	-				+0.6
6,067,599	-				+1.1
6,067,599	-				+1.0
6,067,602	+				-0.3
6,067,602	+				+0.8
6,067,602	+				-0.5
6,067,602	+				+1.9
6,067,602	+				-3.0
6,067,602	+				-2.7
6,067,603	-				-2.8
6,067,603	-				-1.7
6,067,603	-				+0.1
6,067,603	-				-1.0
6,067,603	-				-1.9
6,067,661	+				-0.0
6,067,662	-				-3.7
6,067,662	-				-3.7
6,067,662	-				-1.2
6,067,668	+				-2.0
6,067,668	+				+1.9
6,067,668	+				-1.3
6,067,669	-				-1.2
6,067,827	+		Pf6N2E2_5275	0.14	+1.0
6,067,827	+		Pf6N2E2_5275	0.14	-0.4
6,067,827	+		Pf6N2E2_5275	0.14	+0.2
6,067,828	-		Pf6N2E2_5275	0.14	+1.4
6,067,835	+		Pf6N2E2_5275	0.16	+0.4
6,067,835	+		Pf6N2E2_5275	0.16	+0.2
6,067,835	+		Pf6N2E2_5275	0.16	+2.0
6,067,836	-		Pf6N2E2_5275	0.16	+2.8
6,067,836	-		Pf6N2E2_5275	0.16	-1.6
6,067,863	+		Pf6N2E2_5275	0.21	-0.3
6,067,864	-		Pf6N2E2_5275	0.21	+1.8
6,067,864	-		Pf6N2E2_5275	0.21	-3.2
6,068,108	+		Pf6N2E2_5275	0.64	+1.6
6,068,109	-		Pf6N2E2_5275	0.65	+1.2
6,068,109	-		Pf6N2E2_5275	0.65	-2.2
6,068,301	+				-2.9
6,068,308	+				-2.2
6,068,308	+				-2.2
6,068,308	+				+1.4
6,068,308	+				-1.8
6,068,308	+				-2.5
6,068,308	+				-2.6
6,068,308	+				-0.8
6,068,308	+				+1.1
6,068,309	-				+0.8
6,068,309	-				-2.0
6,068,309	-				+0.6
6,068,309	-				+2.0
6,068,309	-				+0.7
6,068,309	-				-1.5
6,068,309	-				-0.3
6,068,321	-				-0.7
6,068,411	+				-0.7
6,068,411	+				-1.3
6,068,411	+				+1.4
6,068,427	+				+1.5
6,068,427	+				+0.8
6,068,452	+				-0.1
6,068,452	+				+0.1
6,068,452	+				+1.4
6,068,493	+				-2.2
6,068,493	+				-1.8
6,068,493	+				-1.7
6,068,494	-				-3.1
6,068,494	-				+1.6
6,068,494	-				+0.0
6,068,536	+				+1.5
6,068,536	+				-0.2
6,068,536	+				-1.8
6,068,536	+				+0.9
6,068,536	+				+1.5
6,068,537	-				-2.5
6,068,928	+		Pf6N2E2_5276	0.42	+1.9
6,068,949	+		Pf6N2E2_5276	0.44	+1.4
6,068,949	+		Pf6N2E2_5276	0.44	+0.7
6,068,949	+		Pf6N2E2_5276	0.44	+0.0
6,068,949	+		Pf6N2E2_5276	0.44	-0.3
6,068,949	+		Pf6N2E2_5276	0.44	+0.0
6,068,949	+		Pf6N2E2_5276	0.44	+1.2
6,068,949	+		Pf6N2E2_5276	0.44	+0.8
6,068,949	+		Pf6N2E2_5276	0.44	+0.2
6,068,949	+		Pf6N2E2_5276	0.44	-1.0
6,068,950	-		Pf6N2E2_5276	0.44	-0.5
6,068,950	-		Pf6N2E2_5276	0.44	-0.1
6,068,950	-		Pf6N2E2_5276	0.44	-1.1
6,068,950	-		Pf6N2E2_5276	0.44	+0.7
6,068,950	-		Pf6N2E2_5276	0.44	-1.4
6,068,950	-		Pf6N2E2_5276	0.44	-1.4
6,068,950	-		Pf6N2E2_5276	0.44	+1.2
6,068,950	-		Pf6N2E2_5276	0.44	+0.9
6,069,001	+		Pf6N2E2_5276	0.49	+1.3
6,069,001	+		Pf6N2E2_5276	0.49	+1.4
6,069,001	+		Pf6N2E2_5276	0.49	+1.6
6,069,001	+		Pf6N2E2_5276	0.49	+0.5
6,069,001	+		Pf6N2E2_5276	0.49	+2.0
6,069,002	-		Pf6N2E2_5276	0.49	+1.2
6,069,002	-		Pf6N2E2_5276	0.49	+1.4
6,069,002	-		Pf6N2E2_5276	0.49	+2.0
6,069,002	-		Pf6N2E2_5276	0.49	-2.7
6,069,002	-		Pf6N2E2_5276	0.49	-2.0
6,069,105	-		Pf6N2E2_5276	0.60	+3.2
6,069,105	-		Pf6N2E2_5276	0.60	-2.1