Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5136

Experiment: Bile salts 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bile salts 0.0125 M
5,920,695	+		Pf6N2E2_5135	0.22	+1.5
5,920,696	-		Pf6N2E2_5135	0.22	+0.8
5,920,800	+		Pf6N2E2_5135	0.39	+0.2
5,920,801	-		Pf6N2E2_5135	0.39	+1.2
5,920,887	-		Pf6N2E2_5135	0.53	-0.5
5,920,887	-		Pf6N2E2_5135	0.53	+0.2
5,921,054	+		Pf6N2E2_5135	0.79	+0.6
5,921,054	+		Pf6N2E2_5135	0.79	-2.3
5,921,054	+		Pf6N2E2_5135	0.79	+0.2
5,921,054	+		Pf6N2E2_5135	0.79	-0.6
5,921,055	-		Pf6N2E2_5135	0.80	+0.4
5,921,055	-		Pf6N2E2_5135	0.80	-0.2
5,921,055	-		Pf6N2E2_5135	0.80	-4.0
5,921,162	+				-2.7
5,921,162	+				+0.9
5,921,162	+				+2.2
5,921,162	+				-0.3
5,921,162	+				-2.3
5,921,163	-				-2.9
5,921,163	-				+0.6
5,921,194	+				+0.5
5,921,256	+				+0.4
5,921,256	+				+1.0
5,921,256	+				-0.1
5,921,257	-				-0.2
5,921,406	+				+1.4
5,921,407	-				-1.2
5,921,407	-				+0.6
5,921,432	+				+2.1
5,921,467	+				-0.2
5,921,467	+				+0.8
5,921,467	+				+1.6
5,921,468	-				-0.2
5,921,468	-				-2.9
5,921,468	-				-2.6
5,921,471	+				-3.2
5,921,471	+				+0.9
5,921,471	+				-0.3
5,921,472	-				-1.6
5,921,472	-				-0.9
5,921,614	+		Pf6N2E2_5136	0.29	+2.5
5,921,760	+		Pf6N2E2_5136	0.51	-2.4
5,921,761	-		Pf6N2E2_5136	0.51	-3.1
5,921,830	+		Pf6N2E2_5136	0.61	+1.0
5,921,830	+		Pf6N2E2_5136	0.61	+0.8
5,921,830	+		Pf6N2E2_5136	0.61	-1.6
5,921,830	+		Pf6N2E2_5136	0.61	+2.3
5,921,830	+		Pf6N2E2_5136	0.61	+0.4
5,921,830	+		Pf6N2E2_5136	0.61	-2.6
5,921,830	+		Pf6N2E2_5136	0.61	+1.2
5,921,830	+		Pf6N2E2_5136	0.61	+3.3
5,921,830	+		Pf6N2E2_5136	0.61	+0.5
5,921,830	+		Pf6N2E2_5136	0.61	+0.5
5,921,831	-		Pf6N2E2_5136	0.61	+1.1
5,921,831	-		Pf6N2E2_5136	0.61	-0.1
5,921,831	-		Pf6N2E2_5136	0.61	-0.3
5,921,831	-		Pf6N2E2_5136	0.61	-2.7
5,921,831	-		Pf6N2E2_5136	0.61	-2.7
5,921,831	-		Pf6N2E2_5136	0.61	+0.8
5,921,831	-		Pf6N2E2_5136	0.61	-2.9
5,921,831	-		Pf6N2E2_5136	0.61	-2.3
5,921,831	-		Pf6N2E2_5136	0.61	+0.5
5,921,831	-		Pf6N2E2_5136	0.61	-1.2
5,921,831	-		Pf6N2E2_5136	0.61	+0.5
5,921,831	-		Pf6N2E2_5136	0.61	+0.9
5,921,832	+		Pf6N2E2_5136	0.61	-2.4
5,921,832	+		Pf6N2E2_5136	0.61	+2.1
5,921,832	+		Pf6N2E2_5136	0.61	-1.2
5,921,832	+		Pf6N2E2_5136	0.61	-1.9
5,921,832	+		Pf6N2E2_5136	0.61	-1.0
5,921,832	+		Pf6N2E2_5136	0.61	-1.3
5,921,832	+		Pf6N2E2_5136	0.61	+0.4
5,921,833	-		Pf6N2E2_5136	0.61	-2.8
5,921,833	-		Pf6N2E2_5136	0.61	+0.9
5,921,833	-		Pf6N2E2_5136	0.61	+2.8
5,921,908	+		Pf6N2E2_5136	0.72	+2.2
5,921,909	-		Pf6N2E2_5136	0.72	-2.9
5,921,917	-		Pf6N2E2_5136	0.73	-0.2
5,921,917	-		Pf6N2E2_5136	0.73	+1.9
5,921,917	-		Pf6N2E2_5136	0.73	+0.8
5,921,918	+		Pf6N2E2_5136	0.74	-1.1
5,921,918	+		Pf6N2E2_5136	0.74	+0.3
5,921,918	+		Pf6N2E2_5136	0.74	+2.1
5,921,918	+		Pf6N2E2_5136	0.74	+0.5
5,921,919	-		Pf6N2E2_5136	0.74	-0.8
5,921,919	-		Pf6N2E2_5136	0.74	+0.9
5,921,919	-		Pf6N2E2_5136	0.74	+0.8
5,921,919	-		Pf6N2E2_5136	0.74	-3.2
5,921,919	-		Pf6N2E2_5136	0.74	+0.8
5,921,933	-		Pf6N2E2_5136	0.76	-2.0
5,921,957	-		Pf6N2E2_5136	0.79	-1.6
5,921,997	+		Pf6N2E2_5136	0.85	+0.4
5,921,998	-		Pf6N2E2_5136	0.85	-1.3
5,922,061	+				+0.8
5,922,062	-				-3.6
5,922,173	-				+1.1
5,922,173	-				+1.2
5,922,173	-				-2.2
5,922,202	-				-0.6
5,922,358	+		Pf6N2E2_5137	0.87	+0.1
5,922,358	+		Pf6N2E2_5137	0.87	-0.8
5,922,358	+		Pf6N2E2_5137	0.87	+1.6
5,922,359	-		Pf6N2E2_5137	0.88	+1.6
5,922,359	-		Pf6N2E2_5137	0.88	+1.7
5,922,391	+				+0.5
5,922,429	+				-3.5
5,922,429	+				+1.3
5,922,801	+				-2.0
5,922,801	+				+0.5
5,922,802	-				+1.1
5,922,802	-				-0.9
5,922,802	-				+1.4