Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5105

Experiment: Bile salts 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bile salts 0.0125 M
5,885,846	+		Pf6N2E2_5103	0.76	-2.5
5,885,846	+		Pf6N2E2_5103	0.76	-0.7
5,886,287	-		Pf6N2E2_5104	0.36	-1.9
5,886,381	+		Pf6N2E2_5104	0.56	-0.6
5,886,381	+		Pf6N2E2_5104	0.56	-0.5
5,886,381	+		Pf6N2E2_5104	0.56	+0.7
5,886,489	+		Pf6N2E2_5104	0.80	-0.5
5,886,489	+		Pf6N2E2_5104	0.80	+1.3
5,886,490	-		Pf6N2E2_5104	0.80	-0.2
5,886,490	-		Pf6N2E2_5104	0.80	+1.5
5,886,500	-		Pf6N2E2_5104	0.82	+1.2
5,886,500	-		Pf6N2E2_5104	0.82	-0.9
5,886,508	+		Pf6N2E2_5104	0.84	-3.3
5,886,508	+		Pf6N2E2_5104	0.84	+0.9
5,886,577	+				-0.5
5,886,578	-				+2.3
5,886,617	+				+1.1
5,886,621	+				-0.4
5,886,622	-				+0.6
5,886,659	+				-1.5
5,886,660	-				-0.5
5,886,660	-				+0.7
5,886,685	+				+0.5
5,886,730	-				-1.3
5,886,760	+				-2.2
5,886,797	+				+0.2
5,886,820	+				+1.1
5,886,820	+				-1.6
5,886,820	+				+0.7
5,886,826	-				-0.7
5,886,826	-				+0.7
5,886,876	+		Pf6N2E2_5105	0.11	-0.3
5,886,876	+		Pf6N2E2_5105	0.11	-0.3
5,886,876	+		Pf6N2E2_5105	0.11	+1.1
5,886,877	-		Pf6N2E2_5105	0.11	-1.5
5,886,906	+		Pf6N2E2_5105	0.12	+0.3
5,886,906	+		Pf6N2E2_5105	0.12	+0.0
5,886,907	-		Pf6N2E2_5105	0.12	+1.4
5,887,120	-		Pf6N2E2_5105	0.23	+0.7
5,887,194	+		Pf6N2E2_5105	0.26	-1.5
5,887,194	+		Pf6N2E2_5105	0.26	-1.5
5,887,261	-		Pf6N2E2_5105	0.29	+0.8
5,887,308	+		Pf6N2E2_5105	0.32	+1.2
5,887,308	+		Pf6N2E2_5105	0.32	-2.8
5,887,308	+		Pf6N2E2_5105	0.32	-0.3
5,887,308	+		Pf6N2E2_5105	0.32	-1.9
5,887,309	-		Pf6N2E2_5105	0.32	-0.7
5,887,309	-		Pf6N2E2_5105	0.32	-1.4
5,887,309	-		Pf6N2E2_5105	0.32	+0.7
5,887,350	+		Pf6N2E2_5105	0.34	-1.6
5,887,392	+		Pf6N2E2_5105	0.36	-2.8
5,887,393	-		Pf6N2E2_5105	0.36	-1.2
5,887,393	-		Pf6N2E2_5105	0.36	+0.0
5,887,393	-		Pf6N2E2_5105	0.36	-1.5
5,887,393	-		Pf6N2E2_5105	0.36	+0.6
5,887,458	+		Pf6N2E2_5105	0.39	-2.2
5,887,458	+		Pf6N2E2_5105	0.39	+1.9
5,887,458	+		Pf6N2E2_5105	0.39	+0.5
5,887,458	+		Pf6N2E2_5105	0.39	-0.5
5,887,459	-		Pf6N2E2_5105	0.39	-0.9
5,887,459	-		Pf6N2E2_5105	0.39	+0.1
5,887,459	-		Pf6N2E2_5105	0.39	-1.8
5,887,459	-		Pf6N2E2_5105	0.39	-1.1
5,887,459	-		Pf6N2E2_5105	0.39	-3.3
5,887,459	-		Pf6N2E2_5105	0.39	-2.5
5,887,459	-		Pf6N2E2_5105	0.39	-2.0
5,887,527	+		Pf6N2E2_5105	0.42	-0.3
5,887,527	+		Pf6N2E2_5105	0.42	-0.0
5,887,527	+		Pf6N2E2_5105	0.42	+1.1
5,887,527	+		Pf6N2E2_5105	0.42	-1.6
5,887,527	+		Pf6N2E2_5105	0.42	-0.4
5,887,527	+		Pf6N2E2_5105	0.42	-2.3
5,887,527	+		Pf6N2E2_5105	0.42	-2.1
5,887,528	-		Pf6N2E2_5105	0.43	+0.1
5,887,528	-		Pf6N2E2_5105	0.43	-1.9
5,887,528	-		Pf6N2E2_5105	0.43	-1.7
5,887,528	-		Pf6N2E2_5105	0.43	+2.2
5,887,528	-		Pf6N2E2_5105	0.43	+0.3
5,887,608	+		Pf6N2E2_5105	0.46	+1.0
5,887,608	+		Pf6N2E2_5105	0.46	-1.7
5,887,608	+		Pf6N2E2_5105	0.46	+2.5
5,887,671	+		Pf6N2E2_5105	0.50	-1.6
5,887,671	+		Pf6N2E2_5105	0.50	+1.6
5,887,671	+		Pf6N2E2_5105	0.50	+2.1
5,887,671	+		Pf6N2E2_5105	0.50	-0.8
5,887,671	+		Pf6N2E2_5105	0.50	-2.2
5,887,671	+		Pf6N2E2_5105	0.50	+1.6
5,887,671	+		Pf6N2E2_5105	0.50	+0.8
5,887,672	-		Pf6N2E2_5105	0.50	-0.8
5,887,672	-		Pf6N2E2_5105	0.50	-1.2
5,887,672	-		Pf6N2E2_5105	0.50	-2.8
5,887,672	-		Pf6N2E2_5105	0.50	+0.5
5,887,672	-		Pf6N2E2_5105	0.50	-2.2
5,887,794	+		Pf6N2E2_5105	0.56	+1.4
5,887,972	-		Pf6N2E2_5105	0.64	-3.0
5,887,995	+		Pf6N2E2_5105	0.65	-1.5
5,888,007	+		Pf6N2E2_5105	0.66	-0.6
5,888,007	+		Pf6N2E2_5105	0.66	+3.5
5,888,008	-		Pf6N2E2_5105	0.66	+0.3
5,888,008	-		Pf6N2E2_5105	0.66	+0.2
5,888,043	+		Pf6N2E2_5105	0.68	+1.2
5,888,043	+		Pf6N2E2_5105	0.68	-2.9
5,888,043	+		Pf6N2E2_5105	0.68	+0.3
5,888,044	-		Pf6N2E2_5105	0.68	+1.2
5,888,075	+		Pf6N2E2_5105	0.69	+1.2
5,888,118	+		Pf6N2E2_5105	0.71	+1.1
5,888,119	-		Pf6N2E2_5105	0.72	+0.6
5,888,119	-		Pf6N2E2_5105	0.72	-0.6
5,888,141	+		Pf6N2E2_5105	0.73	+1.9
5,888,154	+		Pf6N2E2_5105	0.73	+0.6
5,888,154	+		Pf6N2E2_5105	0.73	-1.5
5,888,154	+		Pf6N2E2_5105	0.73	+1.5
5,888,154	+		Pf6N2E2_5105	0.73	-3.3
5,888,154	+		Pf6N2E2_5105	0.73	-0.3
5,888,154	+		Pf6N2E2_5105	0.73	-1.8
5,888,154	+		Pf6N2E2_5105	0.73	-0.4
5,888,155	-		Pf6N2E2_5105	0.73	+1.5
5,888,155	-		Pf6N2E2_5105	0.73	+0.5
5,888,226	+		Pf6N2E2_5105	0.77	-0.7
5,888,226	+		Pf6N2E2_5105	0.77	-0.5
5,888,226	+		Pf6N2E2_5105	0.77	-1.1
5,888,226	+		Pf6N2E2_5105	0.77	-1.0
5,888,226	+		Pf6N2E2_5105	0.77	+0.9
5,888,226	+		Pf6N2E2_5105	0.77	+1.4
5,888,226	+		Pf6N2E2_5105	0.77	+1.1
5,888,227	-		Pf6N2E2_5105	0.77	+0.9
5,888,227	-		Pf6N2E2_5105	0.77	+1.2
5,888,227	-		Pf6N2E2_5105	0.77	+1.3
5,888,227	-		Pf6N2E2_5105	0.77	+1.3
5,888,227	-		Pf6N2E2_5105	0.77	+0.0
5,888,250	+		Pf6N2E2_5105	0.78	-0.1
5,888,250	+		Pf6N2E2_5105	0.78	-0.5
5,888,250	+		Pf6N2E2_5105	0.78	+0.1
5,888,250	+		Pf6N2E2_5105	0.78	-1.4
5,888,250	+		Pf6N2E2_5105	0.78	-0.7
5,888,250	+		Pf6N2E2_5105	0.78	-0.3
5,888,250	+		Pf6N2E2_5105	0.78	-1.5
5,888,251	-		Pf6N2E2_5105	0.78	-3.0
5,888,322	+		Pf6N2E2_5105	0.81	-0.7
5,888,322	+		Pf6N2E2_5105	0.81	-2.3
5,888,323	-		Pf6N2E2_5105	0.82	+0.3
5,888,323	-		Pf6N2E2_5105	0.82	-3.7
5,888,333	+		Pf6N2E2_5105	0.82	-1.5
5,888,421	+		Pf6N2E2_5105	0.86	-0.6
5,888,421	+		Pf6N2E2_5105	0.86	-0.4
5,888,422	-		Pf6N2E2_5105	0.86	-2.4
5,888,422	-		Pf6N2E2_5105	0.86	+1.4
5,888,422	-		Pf6N2E2_5105	0.86	+1.1
5,888,425	-		Pf6N2E2_5105	0.87	-0.5
5,888,425	-		Pf6N2E2_5105	0.87	-2.5
5,888,445	+		Pf6N2E2_5105	0.88	+1.2
5,888,445	+		Pf6N2E2_5105	0.88	-0.4
5,888,446	-		Pf6N2E2_5105	0.88	-0.4
5,888,496	+				-2.8
5,888,496	+				+1.3
5,888,496	+				-2.2
5,888,497	-				-1.0
5,888,497	-				-2.5
5,888,497	-				-1.7
5,888,505	+				+0.6
5,888,505	+				+1.7
5,888,511	+				-0.5
5,888,538	+				-0.9
5,888,538	+				+1.1
5,888,538	+				-0.2
5,888,538	+				-2.5
5,888,538	+				+0.6
5,888,539	-				+0.4
5,888,539	-				-1.1
5,888,539	-				-1.3
5,888,541	+				-2.4
5,888,541	+				+0.1
5,888,541	+				+0.8
5,888,541	+				+0.6
5,888,542	-				-2.4
5,888,542	-				+2.2
5,888,542	-				-0.2
5,888,542	-				-1.9
5,888,544	+				+0.4
5,888,544	+				-0.3
5,888,544	+				+0.7
5,888,545	-				-1.3
5,888,596	+				+1.9
5,888,596	+				-2.2
5,888,596	+				-0.4
5,888,596	+				+1.5
5,888,607	+				-1.3
5,888,607	+				-1.7
5,888,607	+				+0.2
5,888,607	+				+1.0
5,888,608	-				-1.0
5,888,608	-				-0.6
5,888,608	-				+1.1
5,888,616	+				+2.1
5,888,616	+				+1.4
5,888,616	+				-2.3
5,888,698	-				+1.7
5,888,698	-				-2.7
5,888,734	+				-1.2
5,888,734	+				-0.4
5,888,734	+				-1.2
5,888,734	+				-0.5
5,888,735	-				-1.4
5,888,795	+				-2.6
5,888,795	+				-0.9
5,888,795	+				-1.6
5,888,796	-				+0.6
5,888,796	-				+1.0
5,889,344	+				-0.7
5,889,393	+				+1.5
5,889,393	+				-1.1