Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4695

Experiment: Bile salts 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bile salts 0.0125 M
5,427,657	+		Pf6N2E2_4694	0.48	+1.1
5,427,657	+		Pf6N2E2_4694	0.48	+0.8
5,427,658	-		Pf6N2E2_4694	0.49	-2.4
5,427,812	-		Pf6N2E2_4694	0.65	-2.8
5,427,973	+		Pf6N2E2_4694	0.82	+0.5
5,427,973	+		Pf6N2E2_4694	0.82	+2.2
5,427,974	-		Pf6N2E2_4694	0.82	+0.5
5,428,073	-				+1.6
5,428,197	+				+1.5
5,428,198	-				-0.2
5,428,198	-				+0.3
5,428,361	+				-0.1
5,428,362	-				-3.1
5,428,519	+		Pf6N2E2_4695	0.16	+0.4
5,428,519	+		Pf6N2E2_4695	0.16	-0.4
5,428,544	+		Pf6N2E2_4695	0.18	-0.6
5,428,544	+		Pf6N2E2_4695	0.18	-0.7
5,428,545	-		Pf6N2E2_4695	0.18	-1.1
5,428,545	-		Pf6N2E2_4695	0.18	+2.7
5,428,558	+		Pf6N2E2_4695	0.19	-3.6
5,428,573	-		Pf6N2E2_4695	0.21	-0.0
5,428,573	-		Pf6N2E2_4695	0.21	+1.8
5,428,612	+		Pf6N2E2_4695	0.24	-1.9
5,428,612	+		Pf6N2E2_4695	0.24	-2.0
5,428,625	+		Pf6N2E2_4695	0.25	-2.1
5,428,625	+		Pf6N2E2_4695	0.25	+0.3
5,428,625	+		Pf6N2E2_4695	0.25	-1.5
5,428,626	-		Pf6N2E2_4695	0.25	-1.1
5,428,626	-		Pf6N2E2_4695	0.25	+0.5
5,428,628	+		Pf6N2E2_4695	0.25	-2.6
5,428,681	-		Pf6N2E2_4695	0.30	+1.8
5,428,681	-		Pf6N2E2_4695	0.30	-1.6
5,428,719	+		Pf6N2E2_4695	0.33	-0.4
5,428,719	+		Pf6N2E2_4695	0.33	+0.1
5,428,719	+		Pf6N2E2_4695	0.33	-0.0
5,428,719	+		Pf6N2E2_4695	0.33	+1.2
5,428,720	-		Pf6N2E2_4695	0.33	+0.1
5,428,720	-		Pf6N2E2_4695	0.33	-1.1
5,428,722	+		Pf6N2E2_4695	0.33	+0.2
5,428,722	+		Pf6N2E2_4695	0.33	+0.7
5,428,722	+		Pf6N2E2_4695	0.33	+1.4
5,428,722	+		Pf6N2E2_4695	0.33	-2.5
5,428,723	-		Pf6N2E2_4695	0.33	-2.5
5,428,723	-		Pf6N2E2_4695	0.33	-1.8
5,428,761	+		Pf6N2E2_4695	0.37	+0.8
5,428,793	-		Pf6N2E2_4695	0.39	+0.4
5,428,849	+		Pf6N2E2_4695	0.44	+2.5
5,428,850	-		Pf6N2E2_4695	0.44	-1.4
5,428,852	+		Pf6N2E2_4695	0.44	-3.2
5,428,939	-		Pf6N2E2_4695	0.52	-2.5
5,429,013	+		Pf6N2E2_4695	0.58	+0.5
5,429,013	+		Pf6N2E2_4695	0.58	-0.3
5,429,013	+		Pf6N2E2_4695	0.58	-3.7
5,429,013	+		Pf6N2E2_4695	0.58	+0.8
5,429,017	+		Pf6N2E2_4695	0.58	+1.5
5,429,017	+		Pf6N2E2_4695	0.58	-0.7
5,429,161	+		Pf6N2E2_4695	0.71	+0.2
5,429,161	+		Pf6N2E2_4695	0.71	-0.6
5,429,219	+		Pf6N2E2_4695	0.76	-3.6
5,429,219	+		Pf6N2E2_4695	0.76	-0.1
5,429,219	+		Pf6N2E2_4695	0.76	+1.8
5,429,220	-		Pf6N2E2_4695	0.76	+1.9
5,429,221	+		Pf6N2E2_4695	0.76	-0.2
5,429,284	+		Pf6N2E2_4695	0.81	+0.6
5,429,285	-		Pf6N2E2_4695	0.81	-2.5
5,429,309	+		Pf6N2E2_4695	0.83	-2.7
5,429,309	+		Pf6N2E2_4695	0.83	+0.8
5,429,310	-		Pf6N2E2_4695	0.84	-0.7
5,429,310	-		Pf6N2E2_4695	0.84	-0.9
5,429,320	+		Pf6N2E2_4695	0.84	-0.0
5,429,320	+		Pf6N2E2_4695	0.84	-0.1
5,429,321	-		Pf6N2E2_4695	0.84	-0.2
5,429,321	-		Pf6N2E2_4695	0.84	-2.1
5,429,341	-		Pf6N2E2_4695	0.86	-1.4
5,429,375	-		Pf6N2E2_4695	0.89	+0.6
5,429,455	+				-1.2
5,429,455	+				-2.2
5,429,455	+				-1.1
5,429,456	-				+0.9
5,429,456	-				-0.9
5,429,456	-				+0.3
5,429,456	-				-1.0
5,429,500	+				-1.5
5,429,500	+				+1.0
5,429,500	+				+0.2
5,429,512	+				-0.6
5,429,512	+				+0.7
5,429,513	-				+1.1
5,429,575	+				+1.1
5,429,575	+				-2.5
5,429,576	-				+3.1
5,429,576	-				+0.6
5,429,578	-				-0.7
5,429,585	+				+0.1
5,429,585	+				+2.3
5,429,586	-				+1.6
5,429,586	-				-1.0
5,429,598	-				-1.4
5,429,599	+				+0.0
5,429,599	+				+2.0
5,429,599	+				+1.2
5,429,600	-				-2.2
5,429,600	-				+1.6
5,429,600	-				+0.7
5,429,604	+				+1.9
5,429,605	-				+1.5
5,429,605	-				-0.3
5,429,605	-				+1.5
5,429,607	-				-2.5
5,429,619	-				-2.1
5,429,626	+				+1.3
5,429,627	-				-1.1
5,429,629	-				-2.2
5,429,640	-				+0.9
5,429,697	+				+1.1
5,429,698	-				+1.1
5,429,708	-				+1.1
5,429,783	+				-1.2
5,429,784	-				-2.4
5,429,816	+				+1.1
5,429,816	+				+0.9
5,429,816	+				-0.0
5,429,817	-				-2.4
5,429,817	-				+0.2
5,429,817	-				-1.1
5,429,831	+		Pf6N2E2_4696	0.12	-2.2
5,429,831	+		Pf6N2E2_4696	0.12	-2.4
5,429,832	-		Pf6N2E2_4696	0.12	-1.0
5,429,832	-		Pf6N2E2_4696	0.12	-2.2
5,429,832	-		Pf6N2E2_4696	0.12	+0.4
5,429,832	-		Pf6N2E2_4696	0.12	-1.2
5,429,832	-		Pf6N2E2_4696	0.12	-1.8
5,430,041	-		Pf6N2E2_4696	0.62	-0.0
5,430,237	-				-3.2
5,430,329	+				-2.2
5,430,329	+				+1.1
5,430,329	+				+1.2
5,430,330	-				-2.0
5,430,330	-				+0.1
5,430,380	+		Pf6N2E2_4697	0.12	-1.5
5,430,380	+		Pf6N2E2_4697	0.12	-2.0
5,430,380	+		Pf6N2E2_4697	0.12	-1.6
5,430,380	+		Pf6N2E2_4697	0.12	-0.6
5,430,380	+		Pf6N2E2_4697	0.12	+0.3
5,430,380	+		Pf6N2E2_4697	0.12	-2.5
5,430,381	-		Pf6N2E2_4697	0.12	-2.0
5,430,381	-		Pf6N2E2_4697	0.12	+1.3
5,430,441	+		Pf6N2E2_4697	0.20	-0.5
5,430,442	-		Pf6N2E2_4697	0.20	+2.0