Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4580

Experiment: Bile salts 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bile salts 0.0125 M
5,309,139	+		Pf6N2E2_4578	0.67	+0.3
5,309,140	-		Pf6N2E2_4578	0.67	-0.0
5,309,140	-		Pf6N2E2_4578	0.67	-2.2
5,309,241	+		Pf6N2E2_4578	0.77	-1.5
5,309,241	+		Pf6N2E2_4578	0.77	-2.7
5,309,241	+		Pf6N2E2_4578	0.77	+0.8
5,309,242	-		Pf6N2E2_4578	0.77	-0.9
5,309,474	+				+0.2
5,309,474	+				-0.0
5,309,474	+				+0.5
5,309,474	+				-1.4
5,309,474	+				+3.5
5,309,475	-				-0.9
5,309,475	-				-1.7
5,309,475	-				-3.0
5,309,540	-				-2.5
5,309,540	-				-3.0
5,309,540	-				-3.5
5,309,542	+				+1.4
5,309,542	+				-1.1
5,309,543	-				-1.9
5,309,543	-				+2.3
5,309,543	-				-2.1
5,309,626	+		Pf6N2E2_4579	0.20	+3.2
5,309,626	+		Pf6N2E2_4579	0.20	+2.9
5,309,627	-		Pf6N2E2_4579	0.20	+2.0
5,309,945	-		Pf6N2E2_4579	0.72	-0.2
5,310,053	+				-1.5
5,310,074	+				-2.1
5,310,115	-				+1.2
5,310,115	-				+0.9
5,310,297	+		Pf6N2E2_4580	0.12	+1.9
5,310,298	-		Pf6N2E2_4580	0.12	-3.1
5,310,315	+		Pf6N2E2_4580	0.14	-2.1
5,310,315	+		Pf6N2E2_4580	0.14	+1.2
5,310,315	+		Pf6N2E2_4580	0.14	-1.7
5,310,315	+		Pf6N2E2_4580	0.14	-2.6
5,310,316	-		Pf6N2E2_4580	0.14	-2.9
5,310,316	-		Pf6N2E2_4580	0.14	+0.3
5,310,316	-		Pf6N2E2_4580	0.14	-1.9
5,310,438	+		Pf6N2E2_4580	0.22	+1.8
5,310,439	-		Pf6N2E2_4580	0.22	+0.3
5,310,472	+		Pf6N2E2_4580	0.24	+2.2
5,310,473	-		Pf6N2E2_4580	0.24	-1.0
5,310,473	-		Pf6N2E2_4580	0.24	-2.3
5,310,473	-		Pf6N2E2_4580	0.24	-3.2
5,310,538	+		Pf6N2E2_4580	0.29	+0.5
5,310,539	-		Pf6N2E2_4580	0.29	-2.0
5,310,550	-		Pf6N2E2_4580	0.29	+0.6
5,310,550	-		Pf6N2E2_4580	0.29	-0.9
5,310,550	-		Pf6N2E2_4580	0.29	+1.4
5,310,550	-		Pf6N2E2_4580	0.29	-0.1
5,310,558	+		Pf6N2E2_4580	0.30	-2.2
5,310,651	+		Pf6N2E2_4580	0.36	-2.4
5,310,954	+		Pf6N2E2_4580	0.56	-1.4
5,310,954	+		Pf6N2E2_4580	0.56	+3.2
5,310,954	+		Pf6N2E2_4580	0.56	-1.7
5,310,954	+		Pf6N2E2_4580	0.56	-1.0
5,310,954	+		Pf6N2E2_4580	0.56	+3.9
5,310,955	-		Pf6N2E2_4580	0.56	-0.4
5,310,970	-		Pf6N2E2_4580	0.57	-2.0
5,311,373	+		Pf6N2E2_4580	0.85	+1.0
5,311,373	+		Pf6N2E2_4580	0.85	-2.5
5,311,373	-		Pf6N2E2_4580	0.85	+0.5
5,311,374	-		Pf6N2E2_4580	0.85	+1.0
5,311,527	+				+3.7
5,311,527	+				+0.7
5,311,528	-				-2.0
5,311,528	-				+1.3
5,311,657	+				+2.8
5,311,657	+				-0.3
5,311,658	-				-0.5
5,311,658	-				+0.6
5,311,658	-				-1.9
5,311,679	+				-2.6
5,311,680	-				+0.4
5,311,798	+		Pf6N2E2_4581	0.15	-2.1
5,311,798	+		Pf6N2E2_4581	0.15	-2.4
5,311,798	+		Pf6N2E2_4581	0.15	+2.8
5,311,798	+		Pf6N2E2_4581	0.15	-1.5
5,311,798	+		Pf6N2E2_4581	0.15	+2.7
5,311,799	-		Pf6N2E2_4581	0.15	-1.5
5,311,799	-		Pf6N2E2_4581	0.15	-0.3
5,311,799	-		Pf6N2E2_4581	0.15	-2.2
5,311,972	+		Pf6N2E2_4581	0.28	-2.7
5,311,973	-		Pf6N2E2_4581	0.28	+0.1
5,311,973	-		Pf6N2E2_4581	0.28	-1.8
5,311,981	+		Pf6N2E2_4581	0.28	-2.3
5,311,981	+		Pf6N2E2_4581	0.28	-1.5
5,311,982	-		Pf6N2E2_4581	0.28	+0.9
5,311,982	-		Pf6N2E2_4581	0.28	+0.3
5,312,255	-		Pf6N2E2_4581	0.49	+1.3
5,312,330	-		Pf6N2E2_4581	0.54	+0.5
5,312,450	-		Pf6N2E2_4581	0.63	+1.6