Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4426

Experiment: Bile salts 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bile salts 0.0125 M
5,156,983	+		Pf6N2E2_4425	0.71	+0.9
5,156,984	-		Pf6N2E2_4425	0.71	-2.0
5,156,997	-		Pf6N2E2_4425	0.72	-0.9
5,157,049	+		Pf6N2E2_4425	0.73	-1.7
5,157,049	+		Pf6N2E2_4425	0.73	-0.8
5,157,049	+		Pf6N2E2_4425	0.73	+0.8
5,157,049	+		Pf6N2E2_4425	0.73	-1.2
5,157,050	-		Pf6N2E2_4425	0.73	-1.7
5,157,050	-		Pf6N2E2_4425	0.73	+1.6
5,157,050	-		Pf6N2E2_4425	0.73	-0.3
5,157,110	+		Pf6N2E2_4425	0.75	+0.1
5,157,110	+		Pf6N2E2_4425	0.75	-0.6
5,157,111	-		Pf6N2E2_4425	0.76	-1.4
5,157,111	-		Pf6N2E2_4425	0.76	-2.2
5,157,118	+		Pf6N2E2_4425	0.76	-1.6
5,157,118	+		Pf6N2E2_4425	0.76	+1.3
5,157,118	+		Pf6N2E2_4425	0.76	-1.2
5,157,118	+		Pf6N2E2_4425	0.76	-0.9
5,157,118	+		Pf6N2E2_4425	0.76	+1.7
5,157,118	+		Pf6N2E2_4425	0.76	+1.5
5,157,118	+		Pf6N2E2_4425	0.76	+1.6
5,157,118	+		Pf6N2E2_4425	0.76	+0.4
5,157,118	+		Pf6N2E2_4425	0.76	+0.3
5,157,118	+		Pf6N2E2_4425	0.76	-2.8
5,157,118	+		Pf6N2E2_4425	0.76	+1.6
5,157,118	+		Pf6N2E2_4425	0.76	-1.7
5,157,119	-		Pf6N2E2_4425	0.76	-2.4
5,157,119	-		Pf6N2E2_4425	0.76	-0.5
5,157,119	-		Pf6N2E2_4425	0.76	-0.1
5,157,119	-		Pf6N2E2_4425	0.76	+1.4
5,157,119	-		Pf6N2E2_4425	0.76	+1.9
5,157,119	-		Pf6N2E2_4425	0.76	+0.1
5,157,119	-		Pf6N2E2_4425	0.76	-2.3
5,157,119	-		Pf6N2E2_4425	0.76	+0.0
5,157,119	-		Pf6N2E2_4425	0.76	-1.0
5,157,119	-		Pf6N2E2_4425	0.76	+1.3
5,157,127	+		Pf6N2E2_4425	0.76	+0.3
5,157,127	+		Pf6N2E2_4425	0.76	+0.2
5,157,127	+		Pf6N2E2_4425	0.76	-2.4
5,157,127	+		Pf6N2E2_4425	0.76	-0.3
5,157,127	+		Pf6N2E2_4425	0.76	-1.4
5,157,127	+		Pf6N2E2_4425	0.76	+0.4
5,157,127	+		Pf6N2E2_4425	0.76	-2.2
5,157,127	+		Pf6N2E2_4425	0.76	+1.0
5,157,127	+		Pf6N2E2_4425	0.76	+1.3
5,157,128	-		Pf6N2E2_4425	0.76	-0.4
5,157,128	-		Pf6N2E2_4425	0.76	-0.7
5,157,128	-		Pf6N2E2_4425	0.76	-2.4
5,157,128	-		Pf6N2E2_4425	0.76	-1.8
5,157,142	+		Pf6N2E2_4425	0.77	-2.4
5,157,142	+		Pf6N2E2_4425	0.77	+1.6
5,157,142	+		Pf6N2E2_4425	0.77	+1.6
5,157,142	+		Pf6N2E2_4425	0.77	-2.1
5,157,143	-		Pf6N2E2_4425	0.77	-3.2
5,157,143	-		Pf6N2E2_4425	0.77	+1.3
5,157,199	+		Pf6N2E2_4425	0.79	+0.6
5,157,199	+		Pf6N2E2_4425	0.79	-0.7
5,157,220	+		Pf6N2E2_4425	0.79	-0.9
5,157,220	+		Pf6N2E2_4425	0.79	+1.1
5,157,220	+		Pf6N2E2_4425	0.79	+0.1
5,157,220	+		Pf6N2E2_4425	0.79	+1.5
5,157,220	+		Pf6N2E2_4425	0.79	-1.7
5,157,220	+		Pf6N2E2_4425	0.79	+0.4
5,157,221	-		Pf6N2E2_4425	0.79	-1.4
5,157,221	-		Pf6N2E2_4425	0.79	+2.7
5,157,221	-		Pf6N2E2_4425	0.79	-2.1
5,157,221	-		Pf6N2E2_4425	0.79	+3.0
5,157,221	-		Pf6N2E2_4425	0.79	-0.4
5,157,221	-		Pf6N2E2_4425	0.79	+1.0
5,157,221	-		Pf6N2E2_4425	0.79	+0.4
5,157,514	+		Pf6N2E2_4425	0.90	+0.3
5,157,515	-		Pf6N2E2_4425	0.90	+0.5
5,157,515	-		Pf6N2E2_4425	0.90	+0.3
5,157,515	-		Pf6N2E2_4425	0.90	+1.7
5,157,554	+				-0.1
5,157,572	-				+1.6
5,157,572	-				+0.8
5,157,572	-				+1.3
5,157,607	+				-2.6
5,157,786	+				+1.4
5,157,787	-				+0.8
5,157,787	-				-1.0
5,157,911	-				-1.8
5,157,911	-				-1.8
5,157,998	+				+1.0
5,157,998	+				-0.5
5,157,998	+				+0.1
5,157,999	-		Pf6N2E2_4426	0.10	-0.8
5,157,999	-		Pf6N2E2_4426	0.10	-0.8
5,157,999	-		Pf6N2E2_4426	0.10	-0.7
5,157,999	-		Pf6N2E2_4426	0.10	+0.2
5,157,999	-		Pf6N2E2_4426	0.10	-0.3
5,158,016	+		Pf6N2E2_4426	0.17	-2.3
5,158,016	+		Pf6N2E2_4426	0.17	+1.2
5,158,016	+		Pf6N2E2_4426	0.17	-1.4
5,158,016	+		Pf6N2E2_4426	0.17	+0.1
5,158,219	+				+0.8
5,158,219	+				-2.4
5,158,219	+				-0.1
5,158,219	+				-0.2
5,158,219	+				-1.6
5,158,220	-				+0.6
5,158,220	-				-3.6
5,158,220	-				+0.7
5,158,220	-				-1.2
5,158,220	-				+1.3
5,158,220	-				-0.4
5,158,220	-				+0.9
5,158,220	-				+1.5
5,158,220	-				+0.8
5,158,220	-				-2.8
5,158,238	-				+0.2
5,158,261	+				+0.2
5,158,261	+				+2.0
5,158,261	+				-1.6
5,158,261	+				+0.3
5,158,262	-				+1.9
5,158,262	-				+1.3
5,158,262	-				-1.7
5,158,262	-				-0.3
5,158,377	+				+1.5
5,158,377	+				-1.6
5,158,377	+				+1.1
5,158,377	+				-2.5
5,158,378	-				+1.6
5,158,378	-				+0.8
5,158,378	-				-0.7
5,158,446	+				-3.2
5,158,446	+				-3.8
5,158,494	+		Pf6N2E2_4427	0.17	+1.3
5,158,591	-		Pf6N2E2_4427	0.51	+0.5
5,158,761	-				+0.3
5,158,761	-				+0.6
5,158,761	-				-0.1
5,158,761	-				-2.9
5,158,797	+				-0.4
5,158,797	+				+1.6
5,158,798	-				+1.2
5,158,810	+				+0.6
5,158,810	+				-0.1
5,158,810	+				+1.1
5,158,810	+				+1.6
5,158,810	+				-0.8
5,158,810	+				+1.7
5,158,810	+				+2.6
5,158,810	+				-3.6
5,158,811	-				-1.7
5,158,812	+				-0.9
5,158,883	+				+2.1
5,158,883	+				-1.8
5,158,884	-				-2.1
5,158,884	-				-1.9
5,158,887	+				-2.4
5,158,887	+				-2.9
5,158,887	+				+1.5
5,158,888	-				-2.0
5,158,890	+				+0.6
5,158,890	+				+0.1
5,158,890	+				+0.7
5,158,890	+				+1.1
5,158,890	+				+1.4
5,158,890	+				-2.6
5,158,891	-				-2.9
5,158,891	-				+1.7
5,158,891	-				-0.7
5,158,891	-				+1.3
5,158,891	-				-1.7
5,158,950	+		Pf6N2E2_4428	0.15	+2.0
5,158,950	+		Pf6N2E2_4428	0.15	-3.4
5,158,951	-		Pf6N2E2_4428	0.15	-1.7
5,159,028	-		Pf6N2E2_4428	0.26	+0.4
5,159,028	-		Pf6N2E2_4428	0.26	-1.9
5,159,055	+		Pf6N2E2_4428	0.30	-2.3
5,159,056	-		Pf6N2E2_4428	0.31	-2.9
5,159,056	-		Pf6N2E2_4428	0.31	-2.4
5,159,056	-		Pf6N2E2_4428	0.31	-3.1
5,159,148	+		Pf6N2E2_4428	0.45	+1.2
5,159,148	+		Pf6N2E2_4428	0.45	+0.1
5,159,148	+		Pf6N2E2_4428	0.45	-2.6
5,159,148	+		Pf6N2E2_4428	0.45	+1.2
5,159,148	+		Pf6N2E2_4428	0.45	-1.1
5,159,149	-		Pf6N2E2_4428	0.45	-0.3
5,159,175	+		Pf6N2E2_4428	0.49	-1.6