Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4239

Experiment: Bile salts 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bile salts 0.0125 M
4,930,039	-		Pf6N2E2_4238	0.28	+0.5
4,930,039	-		Pf6N2E2_4238	0.28	+0.3
4,930,039	-		Pf6N2E2_4238	0.28	+1.0
4,930,039	-		Pf6N2E2_4238	0.28	-2.2
4,930,046	+		Pf6N2E2_4238	0.28	+1.9
4,930,070	+		Pf6N2E2_4238	0.30	-1.3
4,930,071	-		Pf6N2E2_4238	0.30	+1.3
4,930,071	-		Pf6N2E2_4238	0.30	-0.3
4,930,071	-		Pf6N2E2_4238	0.30	+1.7
4,930,071	-		Pf6N2E2_4238	0.30	-0.2
4,930,172	-		Pf6N2E2_4238	0.37	+1.2
4,930,306	+		Pf6N2E2_4238	0.47	-0.7
4,930,326	+		Pf6N2E2_4238	0.49	+1.9
4,930,326	+		Pf6N2E2_4238	0.49	+1.3
4,930,327	-		Pf6N2E2_4238	0.49	-1.9
4,930,327	-		Pf6N2E2_4238	0.49	-1.4
4,930,327	-		Pf6N2E2_4238	0.49	-0.1
4,930,400	-		Pf6N2E2_4238	0.54	-4.0
4,930,400	-		Pf6N2E2_4238	0.54	+0.6
4,930,400	-		Pf6N2E2_4238	0.54	-0.5
4,930,557	-		Pf6N2E2_4238	0.66	-0.3
4,930,629	-		Pf6N2E2_4238	0.71	+1.0
4,930,668	+		Pf6N2E2_4238	0.74	+0.7
4,930,669	-		Pf6N2E2_4238	0.74	+0.9
4,930,714	+		Pf6N2E2_4238	0.77	+0.8
4,930,714	+		Pf6N2E2_4238	0.77	+1.3
4,930,714	+		Pf6N2E2_4238	0.77	+0.1
4,930,714	+		Pf6N2E2_4238	0.77	+0.9
4,930,714	+		Pf6N2E2_4238	0.77	+0.7
4,930,714	+		Pf6N2E2_4238	0.77	+0.1
4,930,714	+		Pf6N2E2_4238	0.77	-2.9
4,930,715	-		Pf6N2E2_4238	0.77	-0.2
4,930,715	-		Pf6N2E2_4238	0.77	-1.9
4,930,873	+		Pf6N2E2_4238	0.89	-0.9
4,930,873	+		Pf6N2E2_4238	0.89	-0.6
4,930,944	+				-2.5
4,930,945	-				-3.3
4,930,995	+				-3.1
4,930,995	+				-1.2
4,930,995	+				+0.8
4,930,996	-				-0.0
4,930,996	-				+0.8
4,930,996	-				+2.2
4,930,996	-				+0.8
4,930,996	-				-1.5
4,930,996	-				-1.2
4,930,996	-				-1.6
4,930,999	+				-2.3
4,930,999	+				+2.3
4,930,999	+				-2.5
4,931,000	-				+1.5
4,931,000	-				+0.5
4,931,000	-				-3.2
4,931,000	-				-0.3
4,931,000	-				-2.1
4,931,131	+				-1.9
4,931,177	-		Pf6N2E2_4239	0.12	-1.7
4,931,223	+		Pf6N2E2_4239	0.16	-1.8
4,931,223	+		Pf6N2E2_4239	0.16	+0.6
4,931,223	+		Pf6N2E2_4239	0.16	-3.9
4,931,224	-		Pf6N2E2_4239	0.16	-1.4
4,931,224	-		Pf6N2E2_4239	0.16	+0.0
4,931,224	-		Pf6N2E2_4239	0.16	+1.0
4,931,328	+		Pf6N2E2_4239	0.24	-2.7
4,931,329	-		Pf6N2E2_4239	0.24	+0.4
4,931,329	-		Pf6N2E2_4239	0.24	+2.5
4,931,329	-		Pf6N2E2_4239	0.24	-2.5
4,931,329	-		Pf6N2E2_4239	0.24	-1.8
4,931,329	-		Pf6N2E2_4239	0.24	+1.6
4,931,357	+		Pf6N2E2_4239	0.26	+0.6
4,931,358	-		Pf6N2E2_4239	0.26	-2.9
4,931,474	+		Pf6N2E2_4239	0.36	-3.4
4,931,474	+		Pf6N2E2_4239	0.36	-1.2
4,931,475	-		Pf6N2E2_4239	0.36	-0.1
4,931,475	-		Pf6N2E2_4239	0.36	-2.0
4,931,475	-		Pf6N2E2_4239	0.36	-2.4
4,931,475	-		Pf6N2E2_4239	0.36	+1.1
4,931,475	-		Pf6N2E2_4239	0.36	-1.6
4,931,475	-		Pf6N2E2_4239	0.36	-1.4
4,931,475	-		Pf6N2E2_4239	0.36	-1.8
4,931,475	-		Pf6N2E2_4239	0.36	+1.1
4,931,475	-		Pf6N2E2_4239	0.36	-2.2
4,931,583	+		Pf6N2E2_4239	0.44	-0.2
4,931,583	+		Pf6N2E2_4239	0.44	+1.8
4,931,584	-		Pf6N2E2_4239	0.44	-3.6
4,931,584	-		Pf6N2E2_4239	0.44	-0.8
4,931,584	-		Pf6N2E2_4239	0.44	-0.5
4,931,584	-		Pf6N2E2_4239	0.44	-2.9
4,931,584	-		Pf6N2E2_4239	0.44	+1.6
4,931,584	-		Pf6N2E2_4239	0.44	+0.7
4,931,584	-		Pf6N2E2_4239	0.44	-2.9
4,931,584	-		Pf6N2E2_4239	0.44	+2.2
4,931,586	+		Pf6N2E2_4239	0.44	-1.2
4,931,586	+		Pf6N2E2_4239	0.44	-1.6
4,931,587	-		Pf6N2E2_4239	0.44	+1.3
4,931,754	+		Pf6N2E2_4239	0.58	+0.9
4,931,754	+		Pf6N2E2_4239	0.58	-2.8
4,931,754	+		Pf6N2E2_4239	0.58	-1.5
4,931,755	-		Pf6N2E2_4239	0.58	+1.8
4,931,853	+		Pf6N2E2_4239	0.65	-1.2
4,931,853	+		Pf6N2E2_4239	0.65	-0.0
4,931,854	-		Pf6N2E2_4239	0.66	-2.6
4,931,854	-		Pf6N2E2_4239	0.66	-0.6
4,932,253	-				-3.4
4,932,253	-				-0.1
4,932,350	-				+0.5
4,932,350	-				+2.9
4,932,350	-				+0.1
4,932,407	+		Pf6N2E2_4240	0.15	+0.3
4,932,407	+		Pf6N2E2_4240	0.15	+0.5
4,932,407	+		Pf6N2E2_4240	0.15	+1.1
4,932,407	+		Pf6N2E2_4240	0.15	+1.3
4,932,408	-		Pf6N2E2_4240	0.15	+0.1
4,932,425	+		Pf6N2E2_4240	0.17	-1.6
4,932,425	+		Pf6N2E2_4240	0.17	+1.0
4,932,425	+		Pf6N2E2_4240	0.17	-2.8
4,932,426	-		Pf6N2E2_4240	0.17	+0.2
4,932,654	+		Pf6N2E2_4240	0.46	+0.4
4,932,654	+		Pf6N2E2_4240	0.46	+0.6
4,932,654	+		Pf6N2E2_4240	0.46	+1.3
4,932,654	+		Pf6N2E2_4240	0.46	-2.9
4,932,655	-		Pf6N2E2_4240	0.46	-3.7
4,932,655	-		Pf6N2E2_4240	0.46	-1.0
4,932,655	-		Pf6N2E2_4240	0.46	+0.9
4,932,869	+		Pf6N2E2_4240	0.73	+0.7
4,932,869	+		Pf6N2E2_4240	0.73	-1.4
4,932,870	-		Pf6N2E2_4240	0.73	-0.1
4,932,870	-		Pf6N2E2_4240	0.73	+0.4
4,932,878	+		Pf6N2E2_4240	0.74	-4.0
4,932,878	+		Pf6N2E2_4240	0.74	+0.2
4,932,879	-		Pf6N2E2_4240	0.74	-2.5
4,932,879	-		Pf6N2E2_4240	0.74	-2.9
4,932,941	+		Pf6N2E2_4240	0.82	-2.1
4,933,042	-				-0.5
4,933,042	-				-2.7
4,933,060	+				-1.8
4,933,067	+				+1.1
4,933,067	+				+0.6
4,933,067	+				-3.1
4,933,102	+				+1.5
4,933,103	-				+2.8
4,933,141	+				-1.1
4,933,141	+				-2.4
4,933,142	-				-2.4
4,933,142	-				+0.4
4,933,142	-				-2.5