Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4196

Experiment: Bile salts 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bile salts 0.0125 M
4,882,160	+		Pf6N2E2_4195	0.79	-4.2
4,882,161	-		Pf6N2E2_4195	0.79	-0.7
4,882,161	-		Pf6N2E2_4195	0.79	-0.2
4,882,211	+		Pf6N2E2_4195	0.83	-0.9
4,882,211	+		Pf6N2E2_4195	0.83	-1.8
4,882,211	+		Pf6N2E2_4195	0.83	+0.8
4,882,211	+		Pf6N2E2_4195	0.83	-2.7
4,882,211	+		Pf6N2E2_4195	0.83	+1.3
4,882,211	+		Pf6N2E2_4195	0.83	-0.8
4,882,211	+		Pf6N2E2_4195	0.83	+2.1
4,882,211	+		Pf6N2E2_4195	0.83	-2.8
4,882,211	+		Pf6N2E2_4195	0.83	-3.3
4,882,211	+		Pf6N2E2_4195	0.83	-2.8
4,882,211	+		Pf6N2E2_4195	0.83	-2.4
4,882,212	-		Pf6N2E2_4195	0.83	+1.5
4,882,212	-		Pf6N2E2_4195	0.83	+1.5
4,882,212	-		Pf6N2E2_4195	0.83	+1.1
4,882,212	-		Pf6N2E2_4195	0.83	-3.2
4,882,212	-		Pf6N2E2_4195	0.83	-1.2
4,882,212	-		Pf6N2E2_4195	0.83	-3.2
4,882,212	-		Pf6N2E2_4195	0.83	-1.2
4,882,212	-		Pf6N2E2_4195	0.83	+2.6
4,882,212	-		Pf6N2E2_4195	0.83	-1.8
4,882,212	-		Pf6N2E2_4195	0.83	+0.2
4,882,212	-		Pf6N2E2_4195	0.83	-3.4
4,882,301	+		Pf6N2E2_4195	0.89	+1.1
4,882,302	-		Pf6N2E2_4195	0.89	+0.3
4,882,302	-		Pf6N2E2_4195	0.89	+0.8
4,882,302	-		Pf6N2E2_4195	0.89	-4.9
4,882,335	+				+1.2
4,882,335	+				-1.2
4,882,384	-				-0.1
4,882,387	+				-1.7
4,882,387	+				-0.6
4,882,387	+				+0.5
4,882,387	+				+1.2
4,882,387	+				+1.3
4,882,387	+				-0.5
4,882,387	+				-0.1
4,882,387	+				-1.9
4,882,387	+				-0.2
4,882,387	+				+1.4
4,882,387	+				-0.2
4,882,387	+				+2.0
4,882,387	+				-0.8
4,882,388	-				+0.9
4,882,388	-				-2.2
4,882,388	-				-3.1
4,882,388	-				-2.3
4,882,388	-				-3.0
4,882,388	-				+1.4
4,882,388	-				+2.4
4,882,388	-				+1.9
4,882,388	-				+1.1
4,882,396	+				+0.6
4,882,396	+				+1.7
4,882,396	+				-1.7
4,882,396	+				-2.8
4,882,396	+				+0.6
4,882,396	+				-0.2
4,882,397	-				-2.4
4,882,397	-				+0.6
4,882,397	-				+1.5
4,882,397	-				-1.2
4,882,459	+				+1.3
4,882,460	-				-3.1
4,882,477	+				-0.7
4,882,477	+				+1.8
4,882,478	-				-3.1
4,882,478	-				-3.4
4,882,478	-				-2.4
4,882,532	-				-1.0
4,882,608	+				+0.6
4,882,647	+				-2.6
4,882,659	+				+1.3
4,882,715	+				-0.1
4,885,268	-				-3.2
4,885,280	-				+1.2
4,885,280	-				-3.9
4,885,280	-				-2.5
4,885,280	-				-2.2
4,885,280	-				-1.2
4,885,307	-		Pf6N2E2_4197	0.12	+0.2
4,885,307	-		Pf6N2E2_4197	0.12	+0.4
4,885,307	-		Pf6N2E2_4197	0.12	-2.4
4,885,380	-		Pf6N2E2_4197	0.19	+1.5
4,885,380	-		Pf6N2E2_4197	0.19	-2.8
4,885,380	-		Pf6N2E2_4197	0.19	-1.8
4,885,384	-		Pf6N2E2_4197	0.19	-2.9
4,885,384	-		Pf6N2E2_4197	0.19	-3.0
4,885,384	-		Pf6N2E2_4197	0.19	-2.4
4,885,384	-		Pf6N2E2_4197	0.19	-2.1
4,885,384	-		Pf6N2E2_4197	0.19	-3.9
4,885,384	-		Pf6N2E2_4197	0.19	-1.2
4,885,384	-		Pf6N2E2_4197	0.19	-2.6
4,885,448	-		Pf6N2E2_4197	0.25	-0.7
4,885,617	-		Pf6N2E2_4197	0.41	-2.0
4,885,617	-		Pf6N2E2_4197	0.41	-1.7
4,885,617	-		Pf6N2E2_4197	0.41	+0.8
4,885,617	-		Pf6N2E2_4197	0.41	-0.2
4,885,617	-		Pf6N2E2_4197	0.41	-1.7
4,885,692	-		Pf6N2E2_4197	0.48	-2.5
4,885,692	-		Pf6N2E2_4197	0.48	-0.6
4,885,692	-		Pf6N2E2_4197	0.48	+0.4
4,885,692	-		Pf6N2E2_4197	0.48	-1.0
4,885,692	-		Pf6N2E2_4197	0.48	-1.9
4,885,692	-		Pf6N2E2_4197	0.48	-3.6
4,885,704	-		Pf6N2E2_4197	0.49	-2.4
4,885,774	-		Pf6N2E2_4197	0.56	+0.6
4,885,906	+		Pf6N2E2_4197	0.68	-1.6
4,885,906	+		Pf6N2E2_4197	0.68	-2.4
4,885,906	+		Pf6N2E2_4197	0.68	-2.4
4,885,907	-		Pf6N2E2_4197	0.68	-0.5
4,886,037	+		Pf6N2E2_4197	0.80	+0.8
4,886,093	+		Pf6N2E2_4197	0.85	-0.7
4,886,093	+		Pf6N2E2_4197	0.85	-0.0
4,886,094	-		Pf6N2E2_4197	0.85	-2.7