Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3738

Experiment: Bile salts 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bile salts 0.0125 M
4,353,535	+		Pf6N2E2_3736	0.86	+0.5
4,353,547	+		Pf6N2E2_3736	0.87	-1.5
4,353,547	+		Pf6N2E2_3736	0.87	+0.9
4,353,548	-		Pf6N2E2_3736	0.87	-1.5
4,353,548	-		Pf6N2E2_3736	0.87	+1.9
4,353,574	-		Pf6N2E2_3736	0.89	+1.5
4,353,709	+				+0.4
4,353,751	+				+0.2
4,353,751	+				-3.6
4,353,752	-				-0.7
4,353,966	+				+1.4
4,353,966	+				-2.3
4,353,967	-				-0.5
4,353,967	-				+1.2
4,353,967	-				-2.7
4,353,967	-				-2.6
4,354,223	+		Pf6N2E2_3737	0.65	-2.1
4,354,277	+		Pf6N2E2_3737	0.77	-1.4
4,354,358	-				-0.1
4,354,358	-				+0.6
4,354,358	-				+2.4
4,354,358	-				+1.6
4,354,365	+				-2.6
4,354,365	+				+1.5
4,354,366	-				+1.5
4,354,366	-				-2.4
4,354,366	-				+0.4
4,354,366	-				+0.2
4,354,727	-		Pf6N2E2_3738	0.32	-2.2
4,354,727	-		Pf6N2E2_3738	0.32	-2.6
4,354,791	+		Pf6N2E2_3738	0.38	-2.8
4,354,792	-		Pf6N2E2_3738	0.38	-2.1
4,355,100	+		Pf6N2E2_3738	0.65	+0.0
4,355,100	+		Pf6N2E2_3738	0.65	-0.9
4,355,464	+				+1.2
4,355,798	-		Pf6N2E2_3739	0.38	+0.1
4,355,933	+		Pf6N2E2_3739	0.54	+2.1
4,356,010	+		Pf6N2E2_3739	0.63	+0.7
4,356,010	+		Pf6N2E2_3739	0.63	-1.0
4,356,011	-		Pf6N2E2_3739	0.63	+1.1
4,356,110	+		Pf6N2E2_3739	0.75	+0.5
4,356,111	-		Pf6N2E2_3739	0.75	-2.5
4,356,128	+		Pf6N2E2_3739	0.77	-2.0
4,356,129	-		Pf6N2E2_3739	0.77	-0.8
4,356,143	+		Pf6N2E2_3739	0.78	+0.0
4,356,144	-		Pf6N2E2_3739	0.79	+1.1
4,356,144	-		Pf6N2E2_3739	0.79	+0.3
4,356,455	-		Pf6N2E2_3740	0.25	-0.4
4,356,455	-		Pf6N2E2_3740	0.25	+0.3
4,356,455	-		Pf6N2E2_3740	0.25	+0.2
4,356,475	+		Pf6N2E2_3740	0.29	-1.5
4,356,475	+		Pf6N2E2_3740	0.29	-2.0
4,356,475	+		Pf6N2E2_3740	0.29	+0.3
4,356,476	-		Pf6N2E2_3740	0.29	-1.5
4,356,476	-		Pf6N2E2_3740	0.29	-1.0