Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3413

Experiment: Bile salts 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bile salts 0.0125 M
3,955,121	+				+1.1
3,955,121	+				+2.3
3,955,122	-				+3.1
3,955,138	-				-0.6
3,955,160	+		Pf6N2E2_3411	0.21	+2.4
3,955,161	-		Pf6N2E2_3411	0.22	+1.1
3,955,161	-		Pf6N2E2_3411	0.22	-2.8
3,955,161	-		Pf6N2E2_3411	0.22	+0.5
3,955,161	-		Pf6N2E2_3411	0.22	+1.2
3,955,187	+		Pf6N2E2_3411	0.43	+0.9
3,955,187	+		Pf6N2E2_3411	0.43	-2.9
3,955,188	-		Pf6N2E2_3411	0.44	-0.3
3,955,193	+		Pf6N2E2_3411	0.48	+0.3
3,955,193	+		Pf6N2E2_3411	0.48	-3.0
3,955,193	+		Pf6N2E2_3411	0.48	-0.8
3,955,193	+		Pf6N2E2_3411	0.48	-1.9
3,955,194	-		Pf6N2E2_3411	0.48	+0.7
3,955,490	-		Pf6N2E2_3412	0.41	-1.4
3,955,555	+		Pf6N2E2_3412	0.52	-1.8
3,955,555	+		Pf6N2E2_3412	0.52	+0.8
3,955,556	-		Pf6N2E2_3412	0.53	-1.4
3,955,640	+		Pf6N2E2_3412	0.68	-2.0
3,955,640	+		Pf6N2E2_3412	0.68	+0.3
3,955,641	-		Pf6N2E2_3412	0.68	+1.5
3,955,689	-		Pf6N2E2_3412	0.77	-2.7
3,955,724	+		Pf6N2E2_3412	0.83	+0.1
3,955,725	-		Pf6N2E2_3412	0.83	+0.7
3,955,752	+		Pf6N2E2_3412	0.88	-2.2
3,955,752	+		Pf6N2E2_3412	0.88	+0.6
3,955,752	+		Pf6N2E2_3412	0.88	+0.6
3,955,753	-		Pf6N2E2_3412	0.88	-1.1
3,955,792	+				-0.7
3,955,793	-				+0.7
3,955,817	-				-2.1
3,956,118	-		Pf6N2E2_3413	0.29	-0.3
3,956,234	+		Pf6N2E2_3413	0.41	+1.8
3,956,235	-		Pf6N2E2_3413	0.42	-2.7
3,956,235	-		Pf6N2E2_3413	0.42	-2.8
3,956,235	-		Pf6N2E2_3413	0.42	+2.8
3,956,235	-		Pf6N2E2_3413	0.42	-0.8
3,956,235	-		Pf6N2E2_3413	0.42	-2.6
3,956,235	-		Pf6N2E2_3413	0.42	+0.1
3,956,235	-		Pf6N2E2_3413	0.42	-2.3
3,956,235	-		Pf6N2E2_3413	0.42	+1.0
3,956,235	-		Pf6N2E2_3413	0.42	+2.0
3,956,355	+		Pf6N2E2_3413	0.54	+0.6
3,956,355	+		Pf6N2E2_3413	0.54	-0.2
3,956,547	+		Pf6N2E2_3413	0.74	-1.4
3,956,547	+		Pf6N2E2_3413	0.74	-2.2
3,956,547	+		Pf6N2E2_3413	0.74	+1.4
3,956,547	+		Pf6N2E2_3413	0.74	+1.2
3,956,548	-		Pf6N2E2_3413	0.75	+0.1
3,956,548	-		Pf6N2E2_3413	0.75	+1.6
3,956,548	-		Pf6N2E2_3413	0.75	+0.2
3,956,548	-		Pf6N2E2_3413	0.75	-2.6
3,956,548	-		Pf6N2E2_3413	0.75	+2.1
3,956,548	-		Pf6N2E2_3413	0.75	-0.1
3,956,548	-		Pf6N2E2_3413	0.75	+1.8
3,956,548	-		Pf6N2E2_3413	0.75	-0.8
3,956,548	-		Pf6N2E2_3413	0.75	+1.0
3,956,707	-				+0.6
3,956,707	-				+1.8
3,956,786	+				-0.1
3,956,786	+				-0.7
3,956,786	+				+1.9
3,956,786	+				+0.4
3,956,791	-				+0.8
3,956,855	+				+1.4
3,956,855	+				+1.1
3,956,855	+				+2.0
3,956,871	+				-1.6
3,956,871	+				-0.6
3,956,871	+				-2.8
3,956,871	+				-0.6
3,956,872	-				+1.8
3,956,910	+				+0.9
3,956,911	-				+1.4
3,956,911	-				-2.0
3,956,943	+				+1.0
3,956,944	-				-1.7
3,956,993	+				-3.0
3,956,993	+				+2.1
3,956,993	+				-0.8
3,956,994	-				+0.6
3,956,994	-				+0.4
3,957,130	+				-0.1
3,957,131	-				+0.9
3,957,131	-				+0.1
3,957,181	+		Pf6N2E2_3414	0.11	+1.7
3,957,182	-		Pf6N2E2_3414	0.11	-0.3
3,957,182	-		Pf6N2E2_3414	0.11	+1.4
3,957,251	+		Pf6N2E2_3414	0.14	-2.0
3,957,251	+		Pf6N2E2_3414	0.14	+0.8
3,957,251	+		Pf6N2E2_3414	0.14	+1.5
3,957,251	+		Pf6N2E2_3414	0.14	-0.1
3,957,251	+		Pf6N2E2_3414	0.14	+1.4
3,957,251	+		Pf6N2E2_3414	0.14	+1.1
3,957,252	-		Pf6N2E2_3414	0.14	-1.7
3,957,252	-		Pf6N2E2_3414	0.14	-0.1
3,957,252	-		Pf6N2E2_3414	0.14	+1.1
3,957,297	-		Pf6N2E2_3414	0.16	-3.0
3,957,297	-		Pf6N2E2_3414	0.16	-1.6
3,957,311	-		Pf6N2E2_3414	0.17	+0.7
3,957,494	+		Pf6N2E2_3414	0.25	-2.6
3,957,518	+		Pf6N2E2_3414	0.26	+1.1
3,957,522	-		Pf6N2E2_3414	0.26	+0.1
3,957,522	-		Pf6N2E2_3414	0.26	-1.5
3,957,545	+		Pf6N2E2_3414	0.27	-3.4
3,957,545	+		Pf6N2E2_3414	0.27	-1.7
3,957,546	-		Pf6N2E2_3414	0.27	+0.3
3,957,546	-		Pf6N2E2_3414	0.27	+2.3
3,957,578	+		Pf6N2E2_3414	0.28	+1.6
3,957,635	+		Pf6N2E2_3414	0.30	-0.3
3,957,635	+		Pf6N2E2_3414	0.30	-1.1
3,957,635	+		Pf6N2E2_3414	0.30	+0.2
3,957,636	-		Pf6N2E2_3414	0.31	-2.7
3,957,651	+		Pf6N2E2_3414	0.31	+1.3
3,957,651	+		Pf6N2E2_3414	0.31	+0.4
3,957,651	+		Pf6N2E2_3414	0.31	-0.8
3,957,652	-		Pf6N2E2_3414	0.31	-0.9
3,957,652	-		Pf6N2E2_3414	0.31	+0.8
3,957,654	+		Pf6N2E2_3414	0.31	+0.2
3,957,654	+		Pf6N2E2_3414	0.31	-0.1
3,957,654	+		Pf6N2E2_3414	0.31	+1.0
3,957,654	+		Pf6N2E2_3414	0.31	-2.7
3,957,655	-		Pf6N2E2_3414	0.31	+1.0
3,957,752	+		Pf6N2E2_3414	0.35	+0.8
3,957,752	+		Pf6N2E2_3414	0.35	-0.1
3,957,752	+		Pf6N2E2_3414	0.35	+0.7
3,957,753	-		Pf6N2E2_3414	0.35	+0.9
3,957,753	-		Pf6N2E2_3414	0.35	+0.2
3,957,753	-		Pf6N2E2_3414	0.35	+0.3
3,957,762	-		Pf6N2E2_3414	0.36	+1.8
3,957,762	-		Pf6N2E2_3414	0.36	-0.9
3,957,762	-		Pf6N2E2_3414	0.36	+0.9
3,957,762	-		Pf6N2E2_3414	0.36	-2.8