Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3218

Experiment: Bile salts 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bile salts 0.0125 M
3,716,592	-		Pf6N2E2_3217	0.48	+2.1
3,716,654	+		Pf6N2E2_3217	0.52	-2.7
3,716,654	+		Pf6N2E2_3217	0.52	-2.3
3,716,654	+		Pf6N2E2_3217	0.52	-1.8
3,716,655	-		Pf6N2E2_3217	0.52	+0.1
3,716,655	-		Pf6N2E2_3217	0.52	-1.6
3,716,732	-		Pf6N2E2_3217	0.56	+0.9
3,716,732	-		Pf6N2E2_3217	0.56	+0.7
3,716,732	-		Pf6N2E2_3217	0.56	+0.0
3,716,732	-		Pf6N2E2_3217	0.56	+1.6
3,716,902	+		Pf6N2E2_3217	0.67	-0.7
3,716,902	+		Pf6N2E2_3217	0.67	-0.6
3,716,902	+		Pf6N2E2_3217	0.67	+1.4
3,716,902	+		Pf6N2E2_3217	0.67	+0.6
3,716,903	-		Pf6N2E2_3217	0.67	-0.3
3,716,903	-		Pf6N2E2_3217	0.67	+1.2
3,717,078	-		Pf6N2E2_3217	0.77	-0.5
3,717,110	+		Pf6N2E2_3217	0.79	-1.1
3,717,292	+				+0.8
3,717,292	+				-2.1
3,717,292	+				-2.3
3,717,292	+				-1.8
3,717,292	+				+0.0
3,717,292	+				+1.1
3,717,293	-				-2.3
3,717,293	-				+0.0
3,717,295	-				-1.5
3,717,450	+				+0.1
3,717,450	+				+0.9
3,717,451	-				-1.4
3,718,061	+				-0.6
3,718,062	-				-0.2
3,718,118	+				-2.1
3,720,969	+		Pf6N2E2_3218	0.45	-1.4
3,721,148	+		Pf6N2E2_3218	0.47	+1.2
3,721,149	-		Pf6N2E2_3218	0.47	+0.2
3,721,310	-		Pf6N2E2_3218	0.49	+0.1
3,721,795	-		Pf6N2E2_3218	0.56	+1.7
3,722,056	+		Pf6N2E2_3218	0.59	+1.6
3,722,644	-		Pf6N2E2_3218	0.67	+0.2
3,722,644	-		Pf6N2E2_3218	0.67	-1.9
3,722,703	-		Pf6N2E2_3218	0.68	+1.1
3,722,882	+		Pf6N2E2_3218	0.70	-0.7
3,722,897	+		Pf6N2E2_3218	0.70	+1.0
3,722,897	+		Pf6N2E2_3218	0.70	+2.6
3,722,897	+		Pf6N2E2_3218	0.70	-2.8
3,722,897	+		Pf6N2E2_3218	0.70	-0.2
3,722,897	+		Pf6N2E2_3218	0.70	+1.6
3,722,898	-		Pf6N2E2_3218	0.70	-0.3
3,722,898	-		Pf6N2E2_3218	0.70	+2.1
3,722,898	-		Pf6N2E2_3218	0.70	+1.6
3,722,898	-		Pf6N2E2_3218	0.70	+0.3
3,722,898	-		Pf6N2E2_3218	0.70	+0.5
3,722,901	+		Pf6N2E2_3218	0.70	+1.8
3,723,030	+		Pf6N2E2_3218	0.72	-2.0
3,723,030	+		Pf6N2E2_3218	0.72	+2.9
3,723,107	+		Pf6N2E2_3218	0.73	+1.0
3,723,108	-		Pf6N2E2_3218	0.73	+2.7
3,723,108	-		Pf6N2E2_3218	0.73	-0.1
3,723,108	-		Pf6N2E2_3218	0.73	-2.7
3,723,108	-		Pf6N2E2_3218	0.73	+1.5
3,723,321	-		Pf6N2E2_3218	0.76	-0.6
3,723,321	-		Pf6N2E2_3218	0.76	+0.1
3,723,360	+		Pf6N2E2_3218	0.76	+2.2
3,723,392	+		Pf6N2E2_3218	0.77	+1.5
3,723,393	-		Pf6N2E2_3218	0.77	-0.4
3,723,393	-		Pf6N2E2_3218	0.77	+1.4
3,723,393	-		Pf6N2E2_3218	0.77	-0.3
3,723,393	-		Pf6N2E2_3218	0.77	+1.3
3,723,393	-		Pf6N2E2_3218	0.77	+1.0
3,723,514	+		Pf6N2E2_3218	0.78	-1.4
3,723,515	-		Pf6N2E2_3218	0.78	+0.1
3,723,515	-		Pf6N2E2_3218	0.78	-0.4
3,723,639	+		Pf6N2E2_3218	0.80	-0.3
3,723,639	+		Pf6N2E2_3218	0.80	-1.7
3,723,639	+		Pf6N2E2_3218	0.80	+0.6
3,723,640	-		Pf6N2E2_3218	0.80	-1.1
3,723,640	-		Pf6N2E2_3218	0.80	-2.6
3,723,653	+		Pf6N2E2_3218	0.80	-0.7
3,723,654	-		Pf6N2E2_3218	0.80	+1.0
3,723,654	-		Pf6N2E2_3218	0.80	-1.6
3,723,654	-		Pf6N2E2_3218	0.80	+1.6
3,723,654	-		Pf6N2E2_3218	0.80	+0.5
3,723,728	+		Pf6N2E2_3218	0.81	-2.5
3,723,729	-		Pf6N2E2_3218	0.81	+1.2
3,723,750	+		Pf6N2E2_3218	0.81	+1.3
3,723,751	-		Pf6N2E2_3218	0.81	-0.9
3,723,751	-		Pf6N2E2_3218	0.81	+1.7
3,724,187	+		Pf6N2E2_3218	0.87	-1.7
3,724,187	+		Pf6N2E2_3218	0.87	+0.4
3,724,187	+		Pf6N2E2_3218	0.87	-2.7
3,724,187	+		Pf6N2E2_3218	0.87	+1.7
3,724,187	+		Pf6N2E2_3218	0.87	-2.6
3,724,187	+		Pf6N2E2_3218	0.87	+2.0
3,724,188	-		Pf6N2E2_3218	0.87	+1.6
3,724,188	-		Pf6N2E2_3218	0.87	+0.6
3,724,188	-		Pf6N2E2_3218	0.87	-3.1
3,724,188	-		Pf6N2E2_3218	0.87	-0.7
3,724,188	-		Pf6N2E2_3218	0.87	+0.4
3,724,581	+				-2.7
3,724,710	-				-0.1
3,724,710	-				+0.1
3,724,768	+				+2.2
3,724,861	+				+0.7
3,724,861	+				+0.1
3,724,862	-				+0.3
3,724,971	+				-1.3
3,725,096	-				+0.8
3,725,122	-				+0.6
3,725,164	+				+0.3
3,725,165	-				-1.8
3,725,165	-				-2.3
3,725,235	+				-1.1
3,725,235	+				-0.9
3,725,238	+				-0.7
3,725,238	+				+0.7
3,725,238	+				-0.2
3,725,238	+				-0.3
3,725,476	+		Pf6N2E2_3219	0.51	-0.7
3,725,476	+		Pf6N2E2_3219	0.51	+2.3
3,725,477	-		Pf6N2E2_3219	0.51	-1.8
3,725,477	-		Pf6N2E2_3219	0.51	-0.5
3,725,477	-		Pf6N2E2_3219	0.51	+2.2
3,725,673	+				-0.1
3,725,791	+				+1.1
3,725,791	+				-2.2
3,725,792	-				+0.5
3,725,795	-				+1.1
3,725,795	-				-0.1
3,725,795	-				-1.0
3,725,911	+		Pf6N2E2_3220	0.13	-0.5
3,726,127	+		Pf6N2E2_3220	0.27	+2.0
3,726,128	-		Pf6N2E2_3220	0.28	-1.1
3,726,142	+		Pf6N2E2_3220	0.28	+0.8
3,726,142	+		Pf6N2E2_3220	0.28	+1.6
3,726,142	+		Pf6N2E2_3220	0.28	+0.4
3,726,142	+		Pf6N2E2_3220	0.28	+1.0
3,726,142	+		Pf6N2E2_3220	0.28	-2.1
3,726,143	-		Pf6N2E2_3220	0.28	+0.7
3,726,143	-		Pf6N2E2_3220	0.28	-2.8
3,726,143	-		Pf6N2E2_3220	0.28	-2.3
3,726,143	-		Pf6N2E2_3220	0.28	+1.0
3,726,143	-		Pf6N2E2_3220	0.28	-0.7
3,726,143	-		Pf6N2E2_3220	0.28	+0.5
3,726,143	-		Pf6N2E2_3220	0.28	+0.4
3,726,154	+		Pf6N2E2_3220	0.29	-0.7
3,726,154	+		Pf6N2E2_3220	0.29	+0.4
3,726,154	+		Pf6N2E2_3220	0.29	+0.8
3,726,155	-		Pf6N2E2_3220	0.29	-0.2
3,726,155	-		Pf6N2E2_3220	0.29	-0.7
3,726,160	+		Pf6N2E2_3220	0.30	-0.7