Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3019

Experiment: Bile salts 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bile salts 0.0125 M
3,504,827	-				-1.8
3,504,835	+				-2.0
3,504,836	-				-2.6
3,504,836	-				-0.3
3,504,874	-				-0.1
3,504,874	-				+0.1
3,504,885	+				+1.4
3,504,886	-				-1.9
3,504,890	-				+0.2
3,504,890	-				+3.9
3,504,890	-				-0.1
3,504,909	+				+0.5
3,504,909	+				+0.9
3,504,910	-				-0.3
3,504,998	+		Pf6N2E2_3017	0.71	+0.1
3,504,999	-		Pf6N2E2_3017	0.72	+1.4
3,504,999	-		Pf6N2E2_3017	0.72	-0.0
3,505,006	-		Pf6N2E2_3017	0.78	-1.5
3,505,073	-				+0.8
3,505,291	+		Pf6N2E2_3018	0.46	-1.2
3,505,291	+		Pf6N2E2_3018	0.46	+0.3
3,505,292	-		Pf6N2E2_3018	0.46	+0.9
3,505,292	-		Pf6N2E2_3018	0.46	+0.4
3,505,361	+		Pf6N2E2_3018	0.58	+0.7
3,505,361	+		Pf6N2E2_3018	0.58	+1.3
3,505,361	+		Pf6N2E2_3018	0.58	+1.2
3,505,362	-		Pf6N2E2_3018	0.59	-0.6
3,505,362	-		Pf6N2E2_3018	0.59	-0.8
3,505,380	-		Pf6N2E2_3018	0.62	+0.7
3,505,502	+		Pf6N2E2_3018	0.83	-3.3
3,505,613	+				-0.3
3,505,614	-				+1.4
3,505,614	-				+0.4
3,505,864	+		Pf6N2E2_3019	0.23	-0.2
3,505,864	+		Pf6N2E2_3019	0.23	-0.2
3,505,865	-		Pf6N2E2_3019	0.23	-1.9
3,505,865	-		Pf6N2E2_3019	0.23	-0.4
3,505,865	-		Pf6N2E2_3019	0.23	-2.1
3,505,961	-		Pf6N2E2_3019	0.42	-2.7
3,505,964	+		Pf6N2E2_3019	0.42	+0.9
3,505,965	-		Pf6N2E2_3019	0.43	-0.6
3,505,965	-		Pf6N2E2_3019	0.43	-1.9
3,506,249	+				+0.1
3,506,250	-				+0.9
3,506,256	+				-0.2
3,506,257	-				-2.5
3,506,257	-				-1.7
3,506,310	+				+0.6
3,506,310	+				-1.1
3,506,310	+				+2.2
3,506,310	+				+1.2
3,506,311	-				-2.2
3,506,358	+				+2.3
3,506,358	+				-0.4
3,506,358	+				+0.6
3,506,358	+				+2.2
3,506,359	-				+1.0
3,506,359	-				+1.2
3,506,409	+		Pf6N2E2_3020	0.13	-0.3
3,506,571	+		Pf6N2E2_3020	0.27	-1.7
3,506,571	+		Pf6N2E2_3020	0.27	+0.6
3,506,643	+		Pf6N2E2_3020	0.33	+1.8
3,506,643	+		Pf6N2E2_3020	0.33	-2.3
3,506,700	+		Pf6N2E2_3020	0.38	+0.2
3,506,701	-		Pf6N2E2_3020	0.38	+0.9
3,506,701	-		Pf6N2E2_3020	0.38	-0.6
3,506,701	-		Pf6N2E2_3020	0.38	+2.1
3,506,731	-		Pf6N2E2_3020	0.41	-2.0
3,506,731	-		Pf6N2E2_3020	0.41	-0.8
3,506,835	+		Pf6N2E2_3020	0.50	-1.7
3,506,835	+		Pf6N2E2_3020	0.50	-1.5
3,506,836	-		Pf6N2E2_3020	0.50	+1.3
3,506,836	-		Pf6N2E2_3020	0.50	-1.6
3,506,907	+		Pf6N2E2_3020	0.56	+1.1
3,506,907	+		Pf6N2E2_3020	0.56	+0.1
3,506,907	+		Pf6N2E2_3020	0.56	+0.5
3,506,908	-		Pf6N2E2_3020	0.56	-1.2
3,506,908	-		Pf6N2E2_3020	0.56	+1.5
3,506,908	-		Pf6N2E2_3020	0.56	-0.0
3,506,908	-		Pf6N2E2_3020	0.56	+1.7
3,506,908	-		Pf6N2E2_3020	0.56	+0.8
3,506,908	-		Pf6N2E2_3020	0.56	-1.0
3,506,908	-		Pf6N2E2_3020	0.56	+1.1
3,507,162	+		Pf6N2E2_3020	0.78	-1.4