Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2947

Experiment: Bile salts 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bile salts 0.0125 M
3,438,089	+				-2.2
3,438,090	-				-1.2
3,438,090	-				-2.2
3,438,090	-				+1.0
3,438,090	-				+0.7
3,438,111	-				+1.6
3,438,148	-				+0.6
3,438,239	+				+2.0
3,438,240	-				+0.0
3,438,357	+		Pf6N2E2_2946	0.18	+0.9
3,438,357	+		Pf6N2E2_2946	0.18	-2.5
3,438,357	+		Pf6N2E2_2946	0.18	+2.0
3,438,357	+		Pf6N2E2_2946	0.18	-0.8
3,438,358	-		Pf6N2E2_2946	0.18	+0.3
3,438,358	-		Pf6N2E2_2946	0.18	-3.4
3,438,358	-		Pf6N2E2_2946	0.18	+2.4
3,438,361	+		Pf6N2E2_2946	0.18	-2.2
3,438,362	-		Pf6N2E2_2946	0.18	-1.5
3,438,404	+		Pf6N2E2_2946	0.24	+0.5
3,438,404	+		Pf6N2E2_2946	0.24	-0.0
3,438,406	+		Pf6N2E2_2946	0.25	+0.3
3,438,406	+		Pf6N2E2_2946	0.25	+1.3
3,438,406	+		Pf6N2E2_2946	0.25	+0.4
3,438,406	+		Pf6N2E2_2946	0.25	-2.2
3,438,407	-		Pf6N2E2_2946	0.25	-2.0
3,438,407	-		Pf6N2E2_2946	0.25	+0.5
3,438,407	-		Pf6N2E2_2946	0.25	+1.0
3,438,543	+		Pf6N2E2_2946	0.43	+1.9
3,438,543	+		Pf6N2E2_2946	0.43	-1.9
3,438,543	+		Pf6N2E2_2946	0.43	-0.9
3,438,544	-		Pf6N2E2_2946	0.44	-0.0
3,438,544	-		Pf6N2E2_2946	0.44	-2.3
3,438,544	-		Pf6N2E2_2946	0.44	+0.7
3,438,544	-		Pf6N2E2_2946	0.44	-0.4
3,438,836	+		Pf6N2E2_2946	0.84	+1.2
3,438,837	-		Pf6N2E2_2946	0.84	-3.6
3,438,942	+				-0.4
3,438,943	-				-1.8
3,438,943	-				-2.0
3,439,020	+				+0.4
3,439,053	+				+1.0
3,439,053	+				-0.9
3,439,054	-				+3.9
3,439,180	+		Pf6N2E2_2947	0.22	-1.6
3,439,181	-		Pf6N2E2_2947	0.22	+2.8
3,439,181	-		Pf6N2E2_2947	0.22	-1.6
3,439,181	-		Pf6N2E2_2947	0.22	+1.7
3,439,225	+		Pf6N2E2_2947	0.29	+1.0
3,439,225	+		Pf6N2E2_2947	0.29	-1.5
3,439,225	+		Pf6N2E2_2947	0.29	-0.5
3,439,225	+		Pf6N2E2_2947	0.29	+0.6
3,439,226	-		Pf6N2E2_2947	0.29	+1.0
3,439,226	-		Pf6N2E2_2947	0.29	+0.9
3,439,226	-		Pf6N2E2_2947	0.29	+1.2
3,439,226	-		Pf6N2E2_2947	0.29	-0.2
3,439,226	-		Pf6N2E2_2947	0.29	+0.4
3,439,226	-		Pf6N2E2_2947	0.29	-0.7
3,439,226	-		Pf6N2E2_2947	0.29	+0.7
3,439,226	-		Pf6N2E2_2947	0.29	+1.2
3,439,546	+		Pf6N2E2_2947	0.80	+1.1
3,439,546	+		Pf6N2E2_2947	0.80	+0.8
3,439,570	+		Pf6N2E2_2947	0.83	-1.5
3,439,570	+		Pf6N2E2_2947	0.83	-1.8
3,439,571	-		Pf6N2E2_2947	0.84	+0.7
3,439,571	-		Pf6N2E2_2947	0.84	+1.0
3,439,571	-		Pf6N2E2_2947	0.84	-2.6
3,439,605	+		Pf6N2E2_2947	0.89	+1.8
3,439,606	-		Pf6N2E2_2947	0.89	+2.0
3,439,606	-		Pf6N2E2_2947	0.89	-0.2
3,439,614	+				-0.0
3,439,615	-				+0.1
3,439,731	+				-0.0
3,439,731	+				-2.4
3,439,731	+				-1.4
3,439,731	+				+0.6
3,439,731	+				-2.1
3,439,731	+				+0.5
3,439,731	+				+0.6
3,439,731	+				-2.7
3,439,731	+				+2.0
3,439,731	+				-0.5
3,439,731	+				-2.4
3,439,731	+				-2.4
3,439,732	-				-2.4
3,439,732	-				-1.6
3,439,732	-				-0.8
3,439,732	-				-0.8
3,439,784	+				+1.7
3,439,785	-				-3.3
3,439,785	-				-0.1
3,440,010	+		Pf6N2E2_2948	0.16	+1.2
3,440,011	-		Pf6N2E2_2948	0.16	+0.1
3,440,011	-		Pf6N2E2_2948	0.16	-2.8
3,440,335	+		Pf6N2E2_2948	0.81	+2.8
3,440,336	-		Pf6N2E2_2948	0.81	+2.2
3,440,339	+		Pf6N2E2_2948	0.82	+2.0
3,440,339	+		Pf6N2E2_2948	0.82	+1.2
3,440,339	+		Pf6N2E2_2948	0.82	-1.9
3,440,340	-		Pf6N2E2_2948	0.82	+0.1
3,440,340	-		Pf6N2E2_2948	0.82	+2.3
3,440,340	-		Pf6N2E2_2948	0.82	-3.0
3,440,354	+		Pf6N2E2_2948	0.85	+0.9
3,440,355	-		Pf6N2E2_2948	0.85	+1.2
3,440,418	-				+0.3
3,440,418	-				-0.0
3,440,554	+		Pf6N2E2_2949	0.25	+1.1
3,440,554	+		Pf6N2E2_2949	0.25	+0.2
3,440,556	+		Pf6N2E2_2949	0.26	-1.3
3,440,563	+		Pf6N2E2_2949	0.27	-1.2
3,440,563	+		Pf6N2E2_2949	0.27	+2.2
3,440,563	+		Pf6N2E2_2949	0.27	+1.9
3,440,564	-		Pf6N2E2_2949	0.27	+1.8
3,440,564	-		Pf6N2E2_2949	0.27	+2.0
3,440,564	-		Pf6N2E2_2949	0.27	+1.5
3,440,564	-		Pf6N2E2_2949	0.27	-0.4
3,440,567	+		Pf6N2E2_2949	0.28	-2.0
3,440,567	+		Pf6N2E2_2949	0.28	+3.2
3,440,567	+		Pf6N2E2_2949	0.28	-1.2
3,440,567	+		Pf6N2E2_2949	0.28	+0.9
3,440,567	+		Pf6N2E2_2949	0.28	+1.6
3,440,567	+		Pf6N2E2_2949	0.28	+1.2
3,440,567	+		Pf6N2E2_2949	0.28	+1.5
3,440,568	-		Pf6N2E2_2949	0.28	+0.1
3,440,568	-		Pf6N2E2_2949	0.28	+0.6
3,440,568	-		Pf6N2E2_2949	0.28	-2.5
3,440,584	+		Pf6N2E2_2949	0.31	+0.0
3,440,584	+		Pf6N2E2_2949	0.31	-1.5
3,440,585	-		Pf6N2E2_2949	0.31	-0.6