Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2720

Experiment: Bile salts 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bile salts 0.0125 M
3,212,150	+		Pf6N2E2_2718	0.86	+1.6
3,212,150	+		Pf6N2E2_2718	0.86	-0.7
3,212,166	+		Pf6N2E2_2718	0.87	+0.3
3,212,167	-		Pf6N2E2_2718	0.87	-2.8
3,212,210	+		Pf6N2E2_2718	0.89	+1.0
3,212,211	-		Pf6N2E2_2718	0.89	+1.2
3,212,265	+				+1.6
3,212,302	+				-2.8
3,212,302	+				-2.7
3,212,303	-				-2.8
3,212,303	-				-1.5
3,212,304	+				-2.9
3,212,304	+				+0.6
3,212,304	+				+0.3
3,212,304	+				-2.2
3,212,305	-				-1.0
3,212,317	-				+0.7
3,212,436	+				+1.0
3,212,452	+				+2.4
3,212,453	-				+0.7
3,212,453	-				+0.8
3,212,553	-				-0.6
3,212,553	-				-0.3
3,212,567	+		Pf6N2E2_2719	0.11	-0.7
3,212,567	+		Pf6N2E2_2719	0.11	-1.7
3,212,568	-		Pf6N2E2_2719	0.11	-2.3
3,212,568	-		Pf6N2E2_2719	0.11	+1.3
3,212,568	-		Pf6N2E2_2719	0.11	+0.3
3,212,568	-		Pf6N2E2_2719	0.11	+1.7
3,212,568	-		Pf6N2E2_2719	0.11	-2.5
3,212,568	-		Pf6N2E2_2719	0.11	+0.9
3,212,568	-		Pf6N2E2_2719	0.11	+1.2
3,212,569	+		Pf6N2E2_2719	0.11	+0.9
3,212,569	+		Pf6N2E2_2719	0.11	+0.8
3,212,570	-		Pf6N2E2_2719	0.11	-0.4
3,212,570	-		Pf6N2E2_2719	0.11	-0.2
3,212,605	+		Pf6N2E2_2719	0.22	+1.7
3,212,605	+		Pf6N2E2_2719	0.22	-1.5
3,212,605	+		Pf6N2E2_2719	0.22	-3.0
3,212,605	+		Pf6N2E2_2719	0.22	-0.9
3,212,605	+		Pf6N2E2_2719	0.22	-0.8
3,212,606	-		Pf6N2E2_2719	0.22	+2.6
3,212,640	-		Pf6N2E2_2719	0.32	-0.2
3,212,652	-		Pf6N2E2_2719	0.36	+0.6
3,212,652	-		Pf6N2E2_2719	0.36	+2.4
3,212,670	-		Pf6N2E2_2719	0.41	+0.6
3,212,689	+		Pf6N2E2_2719	0.47	-3.2
3,212,696	-		Pf6N2E2_2719	0.49	+2.6
3,212,737	+		Pf6N2E2_2719	0.62	-0.1
3,212,737	+		Pf6N2E2_2719	0.62	-0.2
3,212,738	-		Pf6N2E2_2719	0.62	+0.9
3,213,014	+				-0.1
3,213,014	+				+2.6
3,213,017	-				-1.2
3,213,017	-				+1.6
3,213,064	+				+0.8
3,213,065	-				-0.7
3,213,065	-				-1.7
3,213,066	+				+0.5
3,213,066	+				-1.1
3,213,066	+				-0.8
3,213,066	+				+1.6
3,213,067	-				+1.3
3,213,067	-				+0.3
3,213,136	+		Pf6N2E2_2720	0.18	+1.4
3,213,157	+		Pf6N2E2_2720	0.23	-1.3
3,213,157	+		Pf6N2E2_2720	0.23	-0.7
3,213,158	-		Pf6N2E2_2720	0.23	-2.3
3,213,158	-		Pf6N2E2_2720	0.23	+0.6
3,213,172	+		Pf6N2E2_2720	0.26	+2.2
3,213,173	-		Pf6N2E2_2720	0.26	+1.6
3,213,217	+		Pf6N2E2_2720	0.36	+1.0
3,213,217	+		Pf6N2E2_2720	0.36	-2.7
3,213,218	-		Pf6N2E2_2720	0.36	-0.8
3,213,322	+		Pf6N2E2_2720	0.58	+2.0
3,213,322	+		Pf6N2E2_2720	0.58	-0.4
3,213,322	+		Pf6N2E2_2720	0.58	+0.8
3,213,323	-		Pf6N2E2_2720	0.58	-0.9
3,213,323	-		Pf6N2E2_2720	0.58	-2.6
3,213,323	-		Pf6N2E2_2720	0.58	+1.1
3,213,412	+		Pf6N2E2_2720	0.77	+1.1
3,213,412	+		Pf6N2E2_2720	0.77	-0.4
3,213,412	+		Pf6N2E2_2720	0.77	+0.7
3,213,412	+		Pf6N2E2_2720	0.77	+0.6
3,213,412	+		Pf6N2E2_2720	0.77	-2.6
3,213,412	+		Pf6N2E2_2720	0.77	-1.1
3,213,413	-		Pf6N2E2_2720	0.77	-0.9
3,213,413	-		Pf6N2E2_2720	0.77	+0.3
3,213,413	-		Pf6N2E2_2720	0.77	+1.5
3,213,413	-		Pf6N2E2_2720	0.77	-2.9
3,213,413	-		Pf6N2E2_2720	0.77	+1.3
3,213,413	-		Pf6N2E2_2720	0.77	+2.7
3,213,413	-		Pf6N2E2_2720	0.77	+0.6
3,213,413	-		Pf6N2E2_2720	0.77	-0.1
3,213,466	+		Pf6N2E2_2720	0.89	-0.5
3,213,466	+		Pf6N2E2_2720	0.89	+1.0
3,213,467	-		Pf6N2E2_2720	0.89	+0.8
3,213,467	-		Pf6N2E2_2720	0.89	+0.9
3,213,467	-		Pf6N2E2_2720	0.89	+2.4
3,213,568	+				+1.0
3,213,568	+				+0.6
3,213,568	+				+0.3
3,213,568	+				+0.5
3,213,568	+				+0.4
3,213,568	+				-1.6
3,213,569	-				+1.3
3,213,570	+				-0.1
3,213,570	+				-2.7
3,213,570	+				+0.7
3,213,570	+				+1.4
3,213,570	+				+2.0
3,213,571	-				-0.8
3,213,571	-				-1.1
3,213,571	-				+1.1
3,213,582	+				+0.6
3,213,582	+				+0.1
3,213,583	-				+0.4
3,213,605	+				-0.1
3,214,106	+				+1.4
3,214,106	+				-1.3
3,214,107	-				-1.6
3,214,352	-		Pf6N2E2_2722	0.23	-0.8
3,214,399	+		Pf6N2E2_2722	0.27	-0.2
3,214,399	+		Pf6N2E2_2722	0.27	-1.0
3,214,400	-		Pf6N2E2_2722	0.27	-2.4