Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2689

Experiment: Bile salts 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bile salts 0.0125 M
3,177,707	+		Pf6N2E2_2688	0.41	-2.0
3,177,794	+		Pf6N2E2_2688	0.50	+0.8
3,177,815	-		Pf6N2E2_2688	0.52	+1.0
3,177,821	-		Pf6N2E2_2688	0.52	+0.0
3,177,821	-		Pf6N2E2_2688	0.52	-1.6
3,178,037	+		Pf6N2E2_2688	0.73	+0.6
3,178,192	+		Pf6N2E2_2688	0.88	+0.3
3,178,253	-				-2.0
3,178,316	+				+0.9
3,178,316	+				+0.9
3,178,415	-				+1.0
3,178,417	-				-2.2
3,178,417	-				+1.1
3,178,570	-		Pf6N2E2_2689	0.24	-0.8
3,178,629	-		Pf6N2E2_2689	0.29	+0.8
3,178,871	+		Pf6N2E2_2689	0.52	+1.6
3,178,872	-		Pf6N2E2_2689	0.52	+0.2
3,178,872	-		Pf6N2E2_2689	0.52	-2.2
3,178,878	-		Pf6N2E2_2689	0.52	+1.6
3,179,026	-		Pf6N2E2_2689	0.66	-2.2
3,179,118	+		Pf6N2E2_2689	0.75	-1.5
3,179,137	+		Pf6N2E2_2689	0.76	-3.3
3,179,277	+		Pf6N2E2_2689	0.89	-1.3
3,179,278	-		Pf6N2E2_2689	0.89	+0.7
3,179,309	+				-0.5
3,179,310	-				-0.5
3,179,310	-				+0.3
3,179,333	+				-3.0
3,179,334	-				+0.1
3,179,356	-				-2.5
3,179,412	+				+0.8
3,179,412	+				+0.3
3,179,412	+				-2.7
3,179,412	+				+1.0
3,179,412	+				+0.5
3,179,412	+				+1.7
3,179,412	+				+0.7
3,179,412	+				+1.2
3,179,412	+				-0.2
3,179,412	+				-0.4
3,179,413	-				+1.8
3,179,413	-				-1.3
3,179,413	-				+0.5
3,179,413	-				-0.6
3,179,413	-				-3.2
3,179,413	-				-0.8
3,179,413	-				+1.0
3,179,413	-				-1.2
3,179,413	-				-0.7
3,179,413	-				+1.5
3,179,413	-				+0.3
3,179,430	+				+0.5
3,179,430	+				+0.4
3,179,430	+				+0.1
3,179,430	+				+0.5
3,179,430	+				-0.6
3,179,430	+				-0.7
3,179,430	+				+1.4
3,179,431	-				-0.2
3,179,431	-				+1.8
3,179,431	-				+2.1
3,179,431	-				-1.0
3,179,484	+				+0.8
3,179,484	+				-0.4
3,179,484	+				-3.6
3,179,485	-				+0.0
3,179,570	+				+1.0
3,179,570	+				+0.8
3,179,571	-				+0.2
3,179,571	-				+0.4
3,179,571	-				+0.4
3,179,571	-				+0.4
3,179,572	+				+1.4
3,179,573	-				+0.0
3,179,573	-				-1.5
3,179,587	+				-0.2
3,179,596	+				-3.7
3,179,596	+				+0.9
3,179,596	+				-2.5
3,179,596	+				+1.1
3,179,596	+				-0.5
3,179,597	-				+1.7
3,179,674	+				+0.7
3,179,674	+				-1.6
3,179,674	+				+0.8
3,179,674	+				-3.2
3,179,674	+				+0.7
3,179,675	-				-0.0
3,179,675	-				-0.5
3,179,708	-				+1.3
3,179,708	-				+0.1
3,179,815	+		Pf6N2E2_2690	0.17	+3.3
3,179,879	+		Pf6N2E2_2690	0.22	-3.6
3,179,879	+		Pf6N2E2_2690	0.22	-1.3
3,179,880	-		Pf6N2E2_2690	0.22	-0.5
3,179,908	+		Pf6N2E2_2690	0.25	+1.5
3,179,909	-		Pf6N2E2_2690	0.25	+0.1
3,179,909	-		Pf6N2E2_2690	0.25	+0.2
3,179,919	+		Pf6N2E2_2690	0.25	+0.3
3,179,919	+		Pf6N2E2_2690	0.25	+0.7
3,179,919	+		Pf6N2E2_2690	0.25	-0.2
3,179,920	-		Pf6N2E2_2690	0.25	-0.2
3,179,920	-		Pf6N2E2_2690	0.25	+1.1
3,179,920	-		Pf6N2E2_2690	0.25	-0.8
3,179,920	-		Pf6N2E2_2690	0.25	-1.9
3,179,920	-		Pf6N2E2_2690	0.25	+1.7
3,179,923	+		Pf6N2E2_2690	0.26	+0.7
3,179,923	+		Pf6N2E2_2690	0.26	-1.1
3,179,923	+		Pf6N2E2_2690	0.26	-1.3
3,179,924	-		Pf6N2E2_2690	0.26	+1.6
3,179,924	-		Pf6N2E2_2690	0.26	+2.4
3,179,924	-		Pf6N2E2_2690	0.26	+0.8
3,179,924	-		Pf6N2E2_2690	0.26	-0.7
3,179,924	-		Pf6N2E2_2690	0.26	-1.3
3,179,986	+		Pf6N2E2_2690	0.31	+1.0
3,179,986	+		Pf6N2E2_2690	0.31	+0.1
3,179,986	+		Pf6N2E2_2690	0.31	+0.9
3,179,987	-		Pf6N2E2_2690	0.31	+0.8
3,179,987	-		Pf6N2E2_2690	0.31	+0.6
3,179,987	-		Pf6N2E2_2690	0.31	-1.7
3,179,987	-		Pf6N2E2_2690	0.31	+0.1
3,180,055	+		Pf6N2E2_2690	0.36	-2.0
3,180,258	+		Pf6N2E2_2690	0.51	+1.3
3,180,321	+		Pf6N2E2_2690	0.56	-0.2
3,180,321	+		Pf6N2E2_2690	0.56	-0.6
3,180,322	-		Pf6N2E2_2690	0.56	+1.2
3,180,322	-		Pf6N2E2_2690	0.56	+0.3
3,180,337	+		Pf6N2E2_2690	0.57	+0.7
3,180,337	+		Pf6N2E2_2690	0.57	-2.7