Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2276

Experiment: Bile salts 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bile salts 0.0125 M
2,689,788	+		Pf6N2E2_2275	0.21	+0.0
2,689,788	+		Pf6N2E2_2275	0.21	-1.7
2,689,788	+		Pf6N2E2_2275	0.21	+0.5
2,689,789	-		Pf6N2E2_2275	0.21	+0.1
2,689,789	-		Pf6N2E2_2275	0.21	-1.3
2,689,852	+		Pf6N2E2_2275	0.28	-0.3
2,689,853	-		Pf6N2E2_2275	0.28	-0.5
2,689,856	+		Pf6N2E2_2275	0.28	-2.0
2,689,856	+		Pf6N2E2_2275	0.28	+0.7
2,689,856	+		Pf6N2E2_2275	0.28	-2.7
2,689,857	-		Pf6N2E2_2275	0.28	+0.3
2,690,014	+		Pf6N2E2_2275	0.44	-0.6
2,690,014	+		Pf6N2E2_2275	0.44	+1.5
2,690,015	-		Pf6N2E2_2275	0.44	+0.7
2,690,015	-		Pf6N2E2_2275	0.44	+0.7
2,690,191	-		Pf6N2E2_2275	0.62	-1.9
2,690,336	+		Pf6N2E2_2275	0.77	-0.9
2,690,336	+		Pf6N2E2_2275	0.77	+0.7
2,690,336	+		Pf6N2E2_2275	0.77	-0.4
2,690,337	-		Pf6N2E2_2275	0.77	+0.3
2,690,337	-		Pf6N2E2_2275	0.77	+1.2
2,690,337	-		Pf6N2E2_2275	0.77	-1.8
2,690,337	-		Pf6N2E2_2275	0.77	-0.2
2,690,337	-		Pf6N2E2_2275	0.77	+0.5
2,690,337	-		Pf6N2E2_2275	0.77	+1.2
2,690,337	-		Pf6N2E2_2275	0.77	+0.2
2,690,383	+		Pf6N2E2_2275	0.81	+0.3
2,690,474	-				+1.8
2,690,474	-				-0.8
2,690,486	-				+0.7
2,690,589	+				-1.4
2,690,589	+				+2.2
2,690,629	-				-2.3
2,690,668	+				-0.8
2,690,668	+				-2.7
2,690,669	-				+1.4
2,690,689	+				-1.6
2,690,690	-				-1.3
2,690,690	-				+0.1
2,690,693	+				-2.1
2,690,693	+				+0.2
2,690,693	+				-0.5
2,690,693	+				+0.7
2,690,693	+				-0.6
2,690,693	+				-1.0
2,690,694	-				+1.5
2,690,694	-				+0.9
2,690,694	-				-1.6
2,690,694	-				-2.3
2,690,694	-				+0.7
2,690,694	-				-2.1
2,690,694	-				+1.2
2,690,694	-				+1.1
2,690,694	-				-0.1
2,690,694	-				-0.5
2,690,694	-				-0.8
2,690,694	-				-2.9
2,690,779	+				+1.7
2,690,779	+				+0.2
2,690,780	-				+0.7
2,690,780	-				+0.9
2,690,914	+		Pf6N2E2_2276	0.17	-0.3
2,691,101	-		Pf6N2E2_2276	0.31	+0.0
2,691,101	-		Pf6N2E2_2276	0.31	+1.0
2,691,443	-		Pf6N2E2_2276	0.57	-2.3
2,691,457	+		Pf6N2E2_2276	0.58	+0.9
2,691,458	-		Pf6N2E2_2276	0.59	+0.7
2,691,588	+		Pf6N2E2_2276	0.69	-1.2
2,691,589	-		Pf6N2E2_2276	0.69	-0.8
2,691,721	+		Pf6N2E2_2276	0.79	+0.7
2,691,721	+		Pf6N2E2_2276	0.79	-0.4
2,691,721	+		Pf6N2E2_2276	0.79	-1.0
2,691,796	+		Pf6N2E2_2276	0.85	-1.8
2,691,797	-		Pf6N2E2_2276	0.85	-0.1
2,691,797	-		Pf6N2E2_2276	0.85	-0.7
2,691,828	+		Pf6N2E2_2276	0.87	-3.1
2,691,829	-		Pf6N2E2_2276	0.87	-3.1
2,691,829	-		Pf6N2E2_2276	0.87	-0.6
2,691,843	+		Pf6N2E2_2276	0.88	-2.1
2,691,843	+		Pf6N2E2_2276	0.88	-0.3
2,691,843	+		Pf6N2E2_2276	0.88	+2.2
2,691,843	+		Pf6N2E2_2276	0.88	-1.1
2,691,843	+		Pf6N2E2_2276	0.88	+1.0
2,691,843	+		Pf6N2E2_2276	0.88	-1.2
2,691,843	+		Pf6N2E2_2276	0.88	-1.6
2,691,847	+		Pf6N2E2_2276	0.88	+1.0
2,691,847	+		Pf6N2E2_2276	0.88	-3.0
2,691,847	+		Pf6N2E2_2276	0.88	+0.7
2,691,847	+		Pf6N2E2_2276	0.88	-0.2
2,691,847	+		Pf6N2E2_2276	0.88	+0.9
2,691,848	-		Pf6N2E2_2276	0.89	+1.0
2,691,848	-		Pf6N2E2_2276	0.89	-0.2
2,691,848	-		Pf6N2E2_2276	0.89	-1.4
2,691,848	-		Pf6N2E2_2276	0.89	+0.2
2,691,848	-		Pf6N2E2_2276	0.89	+1.6
2,691,848	-		Pf6N2E2_2276	0.89	-0.8
2,691,997	+				+0.6
2,691,997	+				+0.9
2,692,049	-				+1.5
2,692,049	-				-1.7
2,692,121	-				-1.8
2,692,191	-				+2.3
2,692,191	-				+2.2
2,692,343	+		Pf6N2E2_2277	0.18	+2.4
2,692,580	+		Pf6N2E2_2277	0.35	+5.3
2,692,865	+		Pf6N2E2_2277	0.55	-2.1
2,692,874	+		Pf6N2E2_2277	0.56	+1.0
2,692,874	+		Pf6N2E2_2277	0.56	+3.1