Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2241

Experiment: Bile salts 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bile salts 0.0125 M
2,654,891	+				+0.3
2,654,892	-				+1.1
2,655,234	+		Pf6N2E2_2240	0.31	+1.0
2,655,234	+		Pf6N2E2_2240	0.31	-2.1
2,655,237	+		Pf6N2E2_2240	0.31	+0.4
2,655,238	-		Pf6N2E2_2240	0.31	-0.1
2,655,238	-		Pf6N2E2_2240	0.31	-1.1
2,655,238	-		Pf6N2E2_2240	0.31	-3.2
2,655,309	+		Pf6N2E2_2240	0.42	-1.5
2,655,310	-		Pf6N2E2_2240	0.42	+0.3
2,655,463	-		Pf6N2E2_2240	0.65	-3.4
2,655,463	-		Pf6N2E2_2240	0.65	+0.7
2,655,570	+		Pf6N2E2_2240	0.82	-0.5
2,655,571	-		Pf6N2E2_2240	0.82	-2.3
2,655,571	-		Pf6N2E2_2240	0.82	-2.5
2,655,571	-				+1.7
2,655,571	-		Pf6N2E2_2240	0.82	-0.7
2,655,571	-		Pf6N2E2_2240	0.82	-0.1
2,655,571	-		Pf6N2E2_2240	0.82	+0.9
2,655,574	-		Pf6N2E2_2240	0.82	+1.0
2,655,574	-		Pf6N2E2_2240	0.82	-0.6
2,655,657	-				-1.1
2,655,785	-				+1.4
2,655,811	+				+0.3
2,655,811	+				-3.2
2,655,812	-				-0.5
2,655,812	-				+0.4
2,655,835	+				+0.6
2,655,835	+				-0.9
2,655,835	+				-0.3
2,655,835	+				+0.5
2,655,835	+				+1.4
2,655,835	+				-1.1
2,655,835	+				-0.0
2,655,835	+				-0.4
2,655,835	+				+2.6
2,655,836	-				-2.0
2,655,836	-				-0.3
2,655,836	-				-1.3
2,655,836	-				-2.0
2,655,836	-				+1.6
2,655,836	-				+0.9
2,655,836	-				-2.8
2,655,836	-				-1.6
2,655,836	-				+2.1
2,655,836	-				-0.6
2,655,836	-				+1.9
2,655,853	+				+1.0
2,655,853	+				+2.9
2,655,854	-				-1.1
2,655,961	+				+0.3
2,655,961	+				+0.7
2,655,961	+				+0.7
2,655,962	-				+1.1
2,656,071	+		Pf6N2E2_2241	0.15	-2.2
2,656,071	+		Pf6N2E2_2241	0.15	+1.4
2,656,071	+		Pf6N2E2_2241	0.15	-2.2
2,656,071	+		Pf6N2E2_2241	0.15	+1.0
2,656,116	+		Pf6N2E2_2241	0.18	-1.4
2,656,116	+		Pf6N2E2_2241	0.18	-0.4
2,656,116	+		Pf6N2E2_2241	0.18	-0.6
2,656,116	+		Pf6N2E2_2241	0.18	-2.9
2,656,116	+		Pf6N2E2_2241	0.18	+2.3
2,656,116	+		Pf6N2E2_2241	0.18	+0.8
2,656,116	+		Pf6N2E2_2241	0.18	+2.1
2,656,116	+		Pf6N2E2_2241	0.18	+0.7
2,656,116	+		Pf6N2E2_2241	0.18	+2.2
2,656,116	+		Pf6N2E2_2241	0.18	+0.5
2,656,117	-		Pf6N2E2_2241	0.18	-1.4
2,656,117	-		Pf6N2E2_2241	0.18	-1.3
2,656,117	-		Pf6N2E2_2241	0.18	+2.2
2,656,117	-		Pf6N2E2_2241	0.18	-2.3
2,656,117	-		Pf6N2E2_2241	0.18	+1.9
2,656,215	+		Pf6N2E2_2241	0.25	-0.8
2,656,215	+		Pf6N2E2_2241	0.25	+1.1
2,656,215	+		Pf6N2E2_2241	0.25	-1.3
2,656,216	-		Pf6N2E2_2241	0.25	+1.1
2,656,216	-		Pf6N2E2_2241	0.25	-0.3
2,656,216	-		Pf6N2E2_2241	0.25	-0.6
2,656,372	+		Pf6N2E2_2241	0.37	-2.9
2,656,373	-		Pf6N2E2_2241	0.37	-1.7
2,656,373	-		Pf6N2E2_2241	0.37	-0.8
2,656,702	-		Pf6N2E2_2241	0.61	+0.2
2,656,702	-		Pf6N2E2_2241	0.61	+1.4
2,656,716	+		Pf6N2E2_2241	0.62	-1.5
2,656,716	+		Pf6N2E2_2241	0.62	+1.4
2,656,716	+		Pf6N2E2_2241	0.62	-3.3
2,656,717	-		Pf6N2E2_2241	0.62	+0.6
2,656,717	-		Pf6N2E2_2241	0.62	+0.2
2,656,722	+		Pf6N2E2_2241	0.63	-0.0
2,656,722	+		Pf6N2E2_2241	0.63	+0.7
2,656,723	-		Pf6N2E2_2241	0.63	-0.8
2,656,848	+		Pf6N2E2_2241	0.72	-0.6
2,656,848	+		Pf6N2E2_2241	0.72	-1.6
2,656,848	+		Pf6N2E2_2241	0.72	+1.6
2,657,074	+		Pf6N2E2_2241	0.89	+0.2
2,657,075	-		Pf6N2E2_2241	0.89	-0.8
2,657,075	-		Pf6N2E2_2241	0.89	-3.0
2,657,227	-				-1.6
2,657,247	+				-1.4
2,657,247	+				+2.3
2,657,247	+				+2.1
2,657,248	-				+2.3
2,657,588	+		Pf6N2E2_2242	0.84	-2.7
2,657,645	+				+2.7
2,657,645	+				+0.1
2,657,645	+				-0.7
2,657,645	+				+1.4
2,657,645	+				+1.9
2,657,645	+				-2.4
2,657,646	-				-0.3
2,657,646	-				-0.1
2,657,713	+				-1.8
2,657,749	+				-2.5
2,657,750	-				-1.8
2,657,750	-				-1.2
2,657,779	-				-1.3
2,657,870	+		Pf6N2E2_2243	0.26	-0.0
2,657,900	+		Pf6N2E2_2243	0.36	-2.3
2,657,900	+		Pf6N2E2_2243	0.36	-1.3
2,657,900	+		Pf6N2E2_2243	0.36	-0.3
2,657,901	-		Pf6N2E2_2243	0.36	-1.6
2,657,901	-				+3.7
2,657,901	-		Pf6N2E2_2243	0.36	-1.6
2,657,901	-		Pf6N2E2_2243	0.36	+1.6
2,657,901	-		Pf6N2E2_2243	0.36	+1.5
2,657,980	+		Pf6N2E2_2243	0.61	-1.2
2,657,980	+		Pf6N2E2_2243	0.61	+1.0
2,657,980	+		Pf6N2E2_2243	0.61	-1.7
2,657,980	+		Pf6N2E2_2243	0.61	-0.1
2,657,980	+		Pf6N2E2_2243	0.61	-2.3
2,657,981	-		Pf6N2E2_2243	0.61	-1.7
2,657,981	-		Pf6N2E2_2243	0.61	-0.8
2,657,981	-		Pf6N2E2_2243	0.61	-0.3
2,657,983	+		Pf6N2E2_2243	0.62	-1.0
2,657,984	-		Pf6N2E2_2243	0.62	-1.4
2,658,023	+		Pf6N2E2_2243	0.75	-1.7
2,658,023	+		Pf6N2E2_2243	0.75	+0.2
2,658,023	+		Pf6N2E2_2243	0.75	+1.7
2,658,023	+		Pf6N2E2_2243	0.75	+2.8
2,658,023	+		Pf6N2E2_2243	0.75	-0.5
2,658,023	+		Pf6N2E2_2243	0.75	-1.3
2,658,024	-		Pf6N2E2_2243	0.75	+0.2
2,658,024	-		Pf6N2E2_2243	0.75	+0.5
2,658,024	-		Pf6N2E2_2243	0.75	+1.7
2,658,024	-		Pf6N2E2_2243	0.75	-1.7
2,658,025	+		Pf6N2E2_2243	0.75	-1.4
2,658,025	+		Pf6N2E2_2243	0.75	+0.2
2,658,025	+		Pf6N2E2_2243	0.75	-0.8
2,658,075	-				+1.2
2,658,100	+				-0.8
2,658,220	+		Pf6N2E2_2244	0.40	-1.1
2,658,221	-				+0.2