Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2110

Experiment: Bile salts 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bile salts 0.0125 M
2,506,046	+				-2.3
2,506,046	+				-0.7
2,506,046	+				-1.7
2,506,046	+				-1.7
2,506,046	+				-3.0
2,506,046	+				-2.2
2,506,046	+				+2.6
2,506,047	-				+1.1
2,506,047	-				-0.9
2,506,047	-				+1.1
2,506,047	-				-1.1
2,506,047	-				+1.3
2,506,047	-				-0.1
2,506,047	-				-0.2
2,506,047	-				+1.7
2,506,047	-				+1.5
2,506,047	-				+0.5
2,506,047	-				+1.7
2,506,047	-				-1.3
2,506,047	-				+1.1
2,506,047	-				-1.7
2,506,047	-				-1.2
2,506,216	+				-1.5
2,506,216	+				+1.7
2,506,216	+				-1.1
2,506,216	+				-2.5
2,506,216	+				-1.8
2,506,216	+				+2.0
2,506,216	+				-2.2
2,506,217	-				-2.7
2,506,217	-				+1.3
2,506,217	-				+1.4
2,506,217	-				-0.3
2,506,217	-				-2.7
2,506,217	-				-0.4
2,506,330	+		Pf6N2E2_2109	0.19	+0.7
2,506,330	+		Pf6N2E2_2109	0.19	-0.3
2,506,330	+		Pf6N2E2_2109	0.19	-1.3
2,506,331	-		Pf6N2E2_2109	0.19	+1.6
2,506,331	-		Pf6N2E2_2109	0.19	+0.5
2,506,331	-		Pf6N2E2_2109	0.19	+0.9
2,506,855	+		Pf6N2E2_2109	0.81	+1.0
2,506,856	-		Pf6N2E2_2109	0.82	+1.2
2,506,856	-		Pf6N2E2_2109	0.82	-1.2
2,507,008	+				+0.3
2,507,008	+				-0.9
2,507,009	-				-0.5
2,507,009	-				-0.5
2,507,461	+		Pf6N2E2_2110	0.47	+0.0
2,507,461	+		Pf6N2E2_2110	0.47	-2.3
2,507,462	-		Pf6N2E2_2110	0.47	-2.2
2,507,462	-		Pf6N2E2_2110	0.47	+1.7
2,507,462	-		Pf6N2E2_2110	0.47	-0.9
2,507,792	+		Pf6N2E2_2110	0.83	+2.7
2,507,792	+		Pf6N2E2_2110	0.83	+0.8
2,507,793	-		Pf6N2E2_2110	0.83	+1.5
2,507,972	+				-1.7
2,507,973	-				+0.3
2,508,097	+				-1.3
2,508,097	+				+0.2
2,508,098	-				+1.7
2,508,098	-				-1.7
2,508,142	-				-0.5
2,508,307	+		Pf6N2E2_2111	0.28	-0.7
2,508,308	-		Pf6N2E2_2111	0.28	-0.9
2,508,348	+		Pf6N2E2_2111	0.34	+2.5
2,508,348	+				+1.7
2,508,348	+		Pf6N2E2_2111	0.34	-2.5
2,508,349	-		Pf6N2E2_2111	0.34	-0.9
2,508,349	-		Pf6N2E2_2111	0.34	-2.6
2,508,349	-		Pf6N2E2_2111	0.34	-1.9
2,508,744	+				-1.8
2,508,745	-				-2.7
2,508,839	-				-0.7
2,508,839	-				-2.1
2,508,902	+				+1.2
2,508,903	-				-2.7
2,508,903	-				-1.1
2,508,905	+				-0.5