Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2002
Experiment: Bile salts 0.0125 M
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Bile salts 0.0125 M |
|---|---|---|---|---|---|
| remove | |||||
| 2,372,059 | + | -1.9 | |||
| 2,372,500 | - | +1.3 | |||
| 2,372,663 | + | -1.3 | |||
| 2,372,717 | - | -1.6 | |||
| 2,372,937 | - | -0.1 | |||
| 2,373,002 | - | -2.3 | |||
| 2,373,153 | - | -2.0 | |||
| 2,373,716 | - | Pf6N2E2_2002 | 0.41 | -0.7 | |
| 2,373,948 | + | Pf6N2E2_2002 | 0.54 | -0.6 | |
| 2,374,075 | - | Pf6N2E2_2002 | 0.61 | -0.2 | |
| 2,374,078 | - | Pf6N2E2_2002 | 0.62 | -0.3 | |
| 2,374,146 | + | Pf6N2E2_2002 | 0.65 | +0.4 | |
| 2,374,387 | - | Pf6N2E2_2002 | 0.79 | +1.7 | |
| 2,374,389 | + | Pf6N2E2_2002 | 0.79 | -1.8 | |
| 2,375,066 | - | +2.8 | |||
| 2,375,600 | + | Pf6N2E2_2003 | 0.32 | +1.7 | |
| 2,375,670 | + | Pf6N2E2_2003 | 0.38 | -1.2 |
Or see this region's nucleotide sequence