Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1969

Experiment: Bile salts 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bile salts 0.0125 M
2,333,124	-				-3.2
2,333,124	-				+1.5
2,333,159	-				+1.4
2,333,193	-				-1.1
2,333,213	-				-0.9
2,333,213	-				-1.1
2,333,244	+				-1.1
2,333,245	-				+0.5
2,333,254	+				+0.7
2,333,254	+				-2.6
2,333,254	+				-0.4
2,333,254	+				+0.1
2,333,255	-				+1.1
2,333,255	-				-0.6
2,333,255	-				+2.4
2,333,255	-				+2.7
2,333,470	+		Pf6N2E2_1967	0.29	-1.1
2,333,470	+		Pf6N2E2_1967	0.29	-2.5
2,333,470	+		Pf6N2E2_1967	0.29	-2.1
2,333,471	-		Pf6N2E2_1967	0.29	-1.9
2,333,471	-		Pf6N2E2_1967	0.29	+2.0
2,333,479	+		Pf6N2E2_1967	0.31	+0.8
2,333,479	+		Pf6N2E2_1967	0.31	+0.2
2,333,479	+		Pf6N2E2_1967	0.31	-1.3
2,333,479	+		Pf6N2E2_1967	0.31	+0.1
2,333,479	+		Pf6N2E2_1967	0.31	+0.6
2,333,480	-		Pf6N2E2_1967	0.31	+0.7
2,333,499	+		Pf6N2E2_1967	0.34	+0.6
2,333,500	-		Pf6N2E2_1967	0.34	+2.7
2,333,562	+		Pf6N2E2_1967	0.44	+2.3
2,333,563	-		Pf6N2E2_1967	0.44	+0.1
2,333,647	+		Pf6N2E2_1967	0.57	+0.5
2,333,647	+		Pf6N2E2_1967	0.57	+1.4
2,333,647	+		Pf6N2E2_1967	0.57	+1.1
2,333,647	+		Pf6N2E2_1967	0.57	-3.2
2,333,647	+		Pf6N2E2_1967	0.57	-0.9
2,333,647	+		Pf6N2E2_1967	0.57	+1.1
2,333,648	-		Pf6N2E2_1967	0.57	+1.6
2,333,648	-		Pf6N2E2_1967	0.57	-0.3
2,333,648	-		Pf6N2E2_1967	0.57	+2.0
2,333,648	-		Pf6N2E2_1967	0.57	-0.6
2,333,648	-		Pf6N2E2_1967	0.57	-2.8
2,333,648	-		Pf6N2E2_1967	0.57	+0.4
2,333,801	-		Pf6N2E2_1967	0.82	+0.9
2,333,809	+		Pf6N2E2_1967	0.83	-1.3
2,333,842	+		Pf6N2E2_1967	0.88	+1.8
2,333,842	+		Pf6N2E2_1967	0.88	-0.3
2,333,843	-		Pf6N2E2_1967	0.88	-1.4
2,333,904	-				-1.9
2,333,915	+				-2.7
2,333,915	+				-0.2
2,333,915	+				+0.1
2,333,915	+				+1.1
2,333,915	+				+0.5
2,333,915	+				-3.7
2,333,915	+				-1.2
2,333,916	-		Pf6N2E2_1968	0.12	+1.1
2,333,916	-		Pf6N2E2_1968	0.12	+0.9
2,333,916	-		Pf6N2E2_1968	0.12	+1.3
2,333,916	-		Pf6N2E2_1968	0.12	-1.5
2,333,916	-		Pf6N2E2_1968	0.12	-2.3
2,334,041	-				+0.6
2,334,041	-				-0.2
2,334,041	-				+1.9
2,334,154	+		Pf6N2E2_1969	0.21	+2.3
2,334,495	-		Pf6N2E2_1969	0.59	-0.7
2,334,515	+		Pf6N2E2_1969	0.61	-0.9
2,334,515	+		Pf6N2E2_1969	0.61	+0.8
2,334,515	+		Pf6N2E2_1969	0.61	-1.7
2,334,515	+		Pf6N2E2_1969	0.61	-0.9
2,334,515	+		Pf6N2E2_1969	0.61	+2.2
2,334,515	+		Pf6N2E2_1969	0.61	+0.6
2,334,516	-		Pf6N2E2_1969	0.61	+1.0
2,334,516	-		Pf6N2E2_1969	0.61	-2.1
2,334,516	-		Pf6N2E2_1969	0.61	-1.0
2,334,516	-		Pf6N2E2_1969	0.61	+2.8
2,334,516	-		Pf6N2E2_1969	0.61	-2.5
2,334,603	-		Pf6N2E2_1969	0.71	+1.8
2,334,649	+		Pf6N2E2_1969	0.76	-0.6
2,334,679	+		Pf6N2E2_1969	0.80	+1.0
2,334,679	+		Pf6N2E2_1969	0.80	+1.4
2,334,680	-		Pf6N2E2_1969	0.80	+0.7
2,334,680	-		Pf6N2E2_1969	0.80	-0.5
2,334,680	-		Pf6N2E2_1969	0.80	-2.1
2,334,680	-		Pf6N2E2_1969	0.80	+0.7
2,334,689	+		Pf6N2E2_1969	0.81	+1.5
2,334,689	+		Pf6N2E2_1969	0.81	+1.7
2,334,689	+		Pf6N2E2_1969	0.81	+1.4
2,334,689	+		Pf6N2E2_1969	0.81	-0.1
2,334,690	-		Pf6N2E2_1969	0.81	-0.3
2,334,690	-		Pf6N2E2_1969	0.81	-1.4
2,334,690	-		Pf6N2E2_1969	0.81	-0.7
2,334,690	-		Pf6N2E2_1969	0.81	-0.4
2,334,690	-		Pf6N2E2_1969	0.81	-0.9
2,334,690	-		Pf6N2E2_1969	0.81	+0.7
2,334,690	-		Pf6N2E2_1969	0.81	+2.8
2,334,691	+		Pf6N2E2_1969	0.81	+0.8
2,334,692	-		Pf6N2E2_1969	0.81	-1.2
2,334,734	+		Pf6N2E2_1969	0.86	+1.3
2,334,734	+		Pf6N2E2_1969	0.86	+0.7
2,334,735	-		Pf6N2E2_1969	0.86	-1.8
2,334,760	-		Pf6N2E2_1969	0.89	+1.7
2,334,760	-		Pf6N2E2_1969	0.89	-2.7
2,334,760	-		Pf6N2E2_1969	0.89	+1.6
2,334,763	+		Pf6N2E2_1969	0.89	-2.1
2,334,763	+		Pf6N2E2_1969	0.89	-0.6
2,334,763	+		Pf6N2E2_1969	0.89	+0.3
2,334,763	+		Pf6N2E2_1969	0.89	+1.0
2,334,763	+		Pf6N2E2_1969	0.89	-2.5
2,334,763	+		Pf6N2E2_1969	0.89	-1.8
2,334,763	+		Pf6N2E2_1969	0.89	+2.1
2,334,763	+		Pf6N2E2_1969	0.89	-2.9
2,334,764	-		Pf6N2E2_1969	0.89	-1.5
2,334,764	-		Pf6N2E2_1969	0.89	-2.2
2,334,764	-		Pf6N2E2_1969	0.89	+2.1
2,334,764	-		Pf6N2E2_1969	0.89	+1.7
2,334,786	-				-1.8
2,334,995	-				+1.0
2,335,128	+				-1.1
2,335,129	-				+1.0
2,335,149	-				+0.5
2,335,188	-				-1.3
2,335,188	-				+0.7
2,335,190	+				-0.7
2,335,191	-				+0.8
2,335,235	+				+0.5
2,335,236	-				-0.3
2,335,313	-				-0.9
2,335,461	-				-0.7
2,335,537	+				-2.2
2,335,537	+				-2.8
2,335,538	-				-2.7
2,335,538	-				-1.6
2,335,540	+				-0.4
2,335,541	-				-1.3
2,335,541	-				-1.3
2,335,555	+				-0.8
2,335,555	+				-0.3
2,335,556	-				+1.7
2,335,600	-				-1.8
2,335,600	-				+0.6
2,335,600	-				-2.3
2,335,619	-				+1.3
2,335,619	-				-2.2
2,335,690	+				+1.4
2,335,690	+				-0.9
2,335,690	+				-0.1
2,335,690	+				-0.8
2,335,690	+				+0.4
2,335,691	-				-0.2
2,335,691	-				-0.1
2,335,693	+				-1.3
2,335,694	-				+0.7
2,335,694	-				-2.4
2,335,696	+				-1.8
2,335,697	-				+0.3
2,335,705	+				+1.3
2,335,705	+				+0.4
2,335,705	+				+1.1
2,335,705	+				-1.8
2,335,705	+				+0.9
2,335,706	-				+0.0
2,335,706	-				-0.8
2,335,769	+				-1.8