Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1957

Experiment: Bile salts 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bile salts 0.0125 M
2,320,891	-		Pf6N2E2_1956	0.25	-2.6
2,320,899	+		Pf6N2E2_1956	0.26	-0.6
2,320,899	+		Pf6N2E2_1956	0.26	-0.9
2,320,900	-		Pf6N2E2_1956	0.26	-1.1
2,320,900	-		Pf6N2E2_1956	0.26	+2.4
2,320,901	+		Pf6N2E2_1956	0.26	+1.9
2,320,902	-		Pf6N2E2_1956	0.26	-2.0
2,320,928	-		Pf6N2E2_1956	0.28	-0.1
2,320,981	+		Pf6N2E2_1956	0.33	-2.6
2,320,981	+		Pf6N2E2_1956	0.33	-2.1
2,320,982	-		Pf6N2E2_1956	0.33	-1.9
2,321,049	-		Pf6N2E2_1956	0.39	+2.0
2,321,087	-		Pf6N2E2_1956	0.42	+0.2
2,321,102	-		Pf6N2E2_1956	0.43	+0.3
2,321,159	+		Pf6N2E2_1956	0.48	-1.4
2,321,160	-		Pf6N2E2_1956	0.48	-0.4
2,321,160	-		Pf6N2E2_1956	0.48	-1.1
2,321,276	-		Pf6N2E2_1956	0.59	-2.0
2,321,276	-		Pf6N2E2_1956	0.59	-0.6
2,321,419	+		Pf6N2E2_1956	0.71	+1.1
2,321,443	+		Pf6N2E2_1956	0.73	-0.3
2,321,443	+		Pf6N2E2_1956	0.73	-1.6
2,321,443	+		Pf6N2E2_1956	0.73	+0.5
2,321,651	-				-1.0
2,321,743	+				+0.2
2,321,743	+				-2.7
2,321,744	-				-0.6
2,321,830	+				-0.8
2,321,830	+				-0.1
2,321,831	-				+0.8
2,321,858	-				-2.3
2,321,858	-				-0.4
2,321,932	-		Pf6N2E2_1957	0.14	+0.8
2,322,169	-		Pf6N2E2_1957	0.32	-1.9
2,322,206	+		Pf6N2E2_1957	0.35	-1.6
2,322,344	+		Pf6N2E2_1957	0.45	+0.4
2,322,451	+		Pf6N2E2_1957	0.53	-2.8
2,322,484	+		Pf6N2E2_1957	0.56	-1.6
2,322,508	+		Pf6N2E2_1957	0.58	-2.6
2,322,508	+		Pf6N2E2_1957	0.58	-2.0
2,322,611	+		Pf6N2E2_1957	0.65	-1.3
2,322,807	+		Pf6N2E2_1957	0.80	-0.4
2,322,966	+				+0.1
2,322,966	+				-0.2
2,322,967	-				-0.2
2,322,967	-				-2.9
2,322,967	-				+0.6
2,323,029	+				+0.2
2,323,071	-				-0.6
2,323,201	+				-0.6
2,323,201	+				-0.4
2,323,202	-				+1.5
2,323,202	-				+0.4
2,323,459	+		Pf6N2E2_1958	0.41	+0.5
2,323,459	+		Pf6N2E2_1958	0.41	+0.6
2,323,459	+		Pf6N2E2_1958	0.41	+0.6
2,323,459	+		Pf6N2E2_1958	0.41	-0.2
2,323,462	-		Pf6N2E2_1958	0.42	+0.9
2,323,507	-		Pf6N2E2_1958	0.50	+0.6
2,323,777	-				+1.7
2,323,777	-				-0.6
2,323,800	+				+1.2
2,323,804	+				-2.5
2,323,805	-				-0.1
2,323,805	-				-1.3
2,323,805	-				-1.6
2,323,824	+				+0.8
2,323,999	-				-0.4
2,324,016	+				+1.4